RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 C16orf89Q6UX73 402 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 DSTYKQ6XUX3 929 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 C4orf50Q6ZRC1 276 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 RASGRP2Q7LDG7 609 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 SIRT6Q8N6T7 355 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 TSPYL6Q8N831 410 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 USP38Q8NB14 1042 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 NPIPB3Q92617 1050 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 CTHRC1Q96CG8 243 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 RSPRY1Q96DX4 576 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 KRTAP4-12Q9BQ66 201 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 AGXT2Q9BYV1 514 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 KLC2Q9H0B6 622 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 NRDE2Q9H7Z3 1164 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 SAP30LQ9HAJ7 183 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 KLC4Q9NSK0 619 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 OLA1Q9NTK5 396 aaKnown RBP5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 BLOC1S4Q9NUP1 217 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 TMLHEQ9NVH6 421 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 CEP72Q9P209 647 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 DKK2Q9UBU2 259 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 HSF4Q9ULV5 492 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 TBX20Q9UMR3 447 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 RCE1Q9Y256 329 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 AFG3L2Q9Y4W6 797 aa5.34□□□□□ -1.55
HMGB3P31-201ENST00000413333 CCDC187A0A096LP49 1063 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 CENPVL1A0A0U1RR11 272 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 VWC2LB2RUY7 222 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 PEX12O00623 359 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 PLSCR1O15162 318 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 NKX2-8O15522 239 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 ANP32CO43423 234 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 PEX1O43933 1283 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 NXPH3O95157 252 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 ONECUT2O95948 504 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 CSF1P09603 554 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 IGHMBP2P38935 993 aaKnown RBP5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 RCAN1P53805 252 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 PLP2Q04941 152 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 GALNT2Q10471 571 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 BMPR2Q13873 1038 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 NFIXQ14938 502 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 NRN1LQ496H8 165 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 MZT2BQ6NZ67 158 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 LNX2Q8N448 690 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 NGDNQ8NEJ9 315 aaKnown RBP5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 TFAP2BQ92481 460 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 FUBP1Q96AE4 644 aaKnown RBP5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 ZBTB10Q96DT7 871 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 Q96MF0 132 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 C8orf49Q96NF6 230 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 NEUROD6Q96NK8 337 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 PIGSQ96S52 555 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 BARD1Q99728 777 aaKnown RBP5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 ALG8Q9BVK2 526 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 OSBPL5Q9H0X9 879 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 KCTD5Q9NXV2 234 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 KAT6BQ8WYB5 2073 aa5.33□□□□□ -1.56
HMGB3P31-201ENST00000413333 SAC3D1A6NKF1 404 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 K7ESM1 405 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 RTN3O95197 1032 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 ZFXP17010 805 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 ENGP17813 658 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 PCP4P48539 62 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 TXNL4AP83876 142 aaKnown RBP5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 FZD5Q13467 585 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 TDGQ13569 410 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 DCTN1Q14203 1278 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 KRT32Q14532 448 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 GPR68Q15743 365 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 FAM187BQ17R55 369 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 WDR45BQ5MNZ6 344 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 GPATCH4Q5T3I0 446 aaKnown RBP5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 ANO7Q6IWH7 933 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 ACSM6Q6P461 480 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 PTCHD4Q6ZW05 846 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 CHD1LQ86WJ1 897 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 PTGR2Q8N8N7 351 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 RFFLQ8WZ73 363 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 ARRDC3Q96B67 414 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 RNF125Q96EQ8 232 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 PLEKHG4BQ96PX9 1271 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 AIFM2Q9BRQ8 373 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 HERC2P3Q9BVR0 1158 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 ARHGAP39Q9C0H5 1083 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 CLPBQ9H078 707 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 USP29Q9HBJ7 922 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 KCNK9Q9NPC2 374 aa5.32□□□□□ -1.56
HMGB3P31-201ENST00000413333 A0A0G2JLL6 359 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P31-201ENST00000413333 A0A1W2PPH5 198 aa5.31□□□□□ -1.56
HMGB3P31-201ENST00000413333 MBD3L5A6NJ08 208 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P31-201ENST00000413333 SPTLC2O15270 562 aa5.31□□□□□ -1.56
HMGB3P31-201ENST00000413333 HNRNPRO43390 633 aaKnown RBP5.31□□□□□ -1.56
HMGB3P31-201ENST00000413333 PROM1O43490 865 aa5.31□□□□□ -1.56
HMGB3P31-201ENST00000413333 RNASEH2AO75792 299 aaKnown RBP5.31□□□□□ -1.56
HMGB3P31-201ENST00000413333 DLDP09622 509 aaKnown RBP5.31□□□□□ -1.56
HMGB3P31-201ENST00000413333 CHN1P15882 459 aa5.31□□□□□ -1.56
HMGB3P31-201ENST00000413333 HOXA5P20719 270 aa5.31□□□□□ -1.56
HMGB3P31-201ENST00000413333 CTGFP29279 349 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms