RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 KIR2DL1P43626 348 aaPredicted RBP16.89■□□□□ 0.29
DDR1-230ENST00000412274 FNTBP49356 437 aa16.89■□□□□ 0.29
DDR1-230ENST00000412274 COPB1P53618 953 aaKnown RBP16.89■□□□□ 0.29
DDR1-230ENST00000412274 APBA1Q02410 837 aa16.89■□□□□ 0.29
DDR1-230ENST00000412274 KDSRQ06136 332 aa16.89■□□□□ 0.29
DDR1-230ENST00000412274 KLHL40Q2TBA0 621 aa16.89■□□□□ 0.29
DDR1-230ENST00000412274 MPP7Q5T2T1 576 aa16.89■□□□□ 0.29
DDR1-230ENST00000412274 SDE2Q6IQ49 451 aa16.89■□□□□ 0.29
DDR1-230ENST00000412274 CAVIN1Q6NZI2 390 aaKnown RBP16.89■□□□□ 0.29
DDR1-230ENST00000412274 PKN3Q6P5Z2 889 aa16.89■□□□□ 0.29
DDR1-230ENST00000412274 TOGARAM2Q6ZUX3 1019 aa16.89■□□□□ 0.29
DDR1-230ENST00000412274 SLC47A2Q86VL8 602 aa16.89■□□□□ 0.29
DDR1-230ENST00000412274 IPO4Q8TEX9 1081 aaKnown RBP16.89■□□□□ 0.29
DDR1-230ENST00000412274 POLMQ9NP87 494 aaPredicted RBP16.89■□□□□ 0.29
DDR1-230ENST00000412274 FHOD1Q9Y613 1164 aa16.89■□□□□ 0.29
DDR1-230ENST00000412274 KIAA1549LQ6ZVL6 1849 aa16.89■□□□□ 0.29
DDR1-230ENST00000412274 USP34Q70CQ2 3546 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 LGALS16A8MUM7 142 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 F8VZ95 297 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 GFRA2O00451 464 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 PIK3R2O00459 728 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 PAPSS1O43252 624 aaPredicted RBP16.88■□□□□ 0.29
DDR1-230ENST00000412274 TIMM44O43615 452 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 CAVIN2O95810 425 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 SLC2A3P11169 496 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 CYP11B1P15538 503 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 GBP1P32455 592 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 CDH5P33151 784 aaPredicted RBP16.88■□□□□ 0.29
DDR1-230ENST00000412274 SEC13P55735 322 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 TBX4P57082 545 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 SIM2Q14190 667 aaPredicted RBP16.88■□□□□ 0.29
DDR1-230ENST00000412274 CRY1Q16526 586 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 C10orf76Q5T2E6 689 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 FYB2Q5VWT5 728 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 LAIR1Q6GTX8 287 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 WDTC1Q8N5D0 677 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 ZNF513Q8N8E2 541 aaPredicted RBP16.88■□□□□ 0.29
DDR1-230ENST00000412274 TSTD1Q8NFU3 115 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 CLEC4CQ8WTT0 213 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 DDI1Q8WTU0 396 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 UCMAQ8WVF2 138 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 GAB3Q8WWW8 586 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 SYNCQ9H7C4 482 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 ACP6Q9NPH0 428 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 RRN3Q9NYV6 651 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 SLC12A6Q9UHW9 1150 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 CYTH4Q9UIA0 394 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 GMEB2Q9UKD1 530 aa16.88■□□□□ 0.29
DDR1-230ENST00000412274 SMG5Q9UPR3 1016 aaKnown RBP16.88■□□□□ 0.29
DDR1-230ENST00000412274 TYW5A2RUC4 315 aaKnown RBP16.87■□□□□ 0.29
DDR1-230ENST00000412274 AXIN1O15169 862 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 ZBTB24O43167 697 aaPredicted RBP16.87■□□□□ 0.29
DDR1-230ENST00000412274 HSF2BPO75031 334 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 CISD3P0C7P0 127 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 TIE1P35590 1138 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 SCNN1AP37088 669 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 BYSLQ13895 437 aaKnown RBP16.87■□□□□ 0.29
DDR1-230ENST00000412274 NCAPHQ15003 741 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 EIF4HQ15056 248 aaKnown RBP16.87■□□□□ 0.29
DDR1-230ENST00000412274 ANO6Q4KMQ2 910 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 IL17RCQ8NAC3 791 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 NEK11Q8NG66 645 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 DQX1Q8TE96 717 aaKnown RBP16.87■□□□□ 0.29
DDR1-230ENST00000412274 TMA16Q96EY4 203 aaKnown RBP16.87■□□□□ 0.29
DDR1-230ENST00000412274 LOXL4Q96JB6 756 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 SPAG5Q96R06 1193 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 ERGIC2Q96RQ1 377 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 CPXM1Q96SM3 734 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 GANQ9H2C0 597 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 C2orf42Q9NWW7 574 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 NCDNQ9UBB6 729 aa16.87■□□□□ 0.29
DDR1-230ENST00000412274 AJAP1Q9UKB5 411 aaPredicted RBP16.87■□□□□ 0.29
DDR1-230ENST00000412274 HRO43593 1189 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 ACSL4O60488 711 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 FOXD2O60548 495 aaPredicted RBP16.86■□□□□ 0.29
DDR1-230ENST00000412274 LRP3O75074 770 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 KLF8O95600 359 aaPredicted RBP16.86■□□□□ 0.29
DDR1-230ENST00000412274 APOEP02649 317 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 FYNP06241 537 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 CCDC172P0C7W6 258 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 HNRNPLP14866 589 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDR1-230ENST00000412274 NTSR1P30989 418 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 STAT1P42224 750 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 POLR2FP61218 127 aaKnown RBP16.86■□□□□ 0.29
DDR1-230ENST00000412274 CDK17Q00537 523 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 UBXN1Q04323 297 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 SKOR2Q2VWA4 1001 aaPredicted RBP16.86■□□□□ 0.29
DDR1-230ENST00000412274 FILIP1LQ4L180 1135 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 HEATR6Q6AI08 1181 aaKnown RBP16.86■□□□□ 0.29
DDR1-230ENST00000412274 CEP68Q76N32 757 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 CACNA2D4Q7Z3S7 1137 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 ALLCQ8N6M5 410 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 AOPEPQ8N6M6 819 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 TXNDC5Q8NBS9 432 aaKnown RBP16.86■□□□□ 0.29
DDR1-230ENST00000412274 ZNF397Q8NF99 534 aaPredicted RBP16.86■□□□□ 0.29
DDR1-230ENST00000412274 PCMTD1Q96MG8 357 aaPredicted RBP16.86■□□□□ 0.29
DDR1-230ENST00000412274 HINFPQ9BQA5 517 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDR1-230ENST00000412274 NAALADL1Q9UQQ1 740 aa16.86■□□□□ 0.29
DDR1-230ENST00000412274 SIK3Q9Y2K2 1263 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms