RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 LDLRAD3Q86YD5 345 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 DZIP1Q86YF9 867 aaKnown RBP3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 PHYKPLQ8IUZ5 450 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 ZNF444Q8N0Y2 327 aaPredicted RBP3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 SYNE4Q8N205 404 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 RASGEF1CQ8N431 466 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 C7orf31Q8N865 590 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 LRRC57Q8N9N7 239 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 CFAP61Q8NHU2 1237 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 SCFD2Q8WU76 684 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 HDAC7Q8WUI4 952 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 SREK1Q8WXA9 508 aaKnown RBP3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 CASKIN2Q8WXE0 1202 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 TLCD1Q96CP7 247 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 HOOK2Q96ED9 719 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 PGM2Q96G03 612 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 FAM84BQ96KN1 310 aaPredicted RBP3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 CCDC114Q96M63 670 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 GDAP1L1Q96MZ0 367 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 KRT12Q99456 494 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 PSMD1Q99460 953 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 MMTAG2Q9BU76 263 aaKnown RBP3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 TMEM109Q9BVC6 243 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 GPR87Q9BY21 358 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 PITHD1Q9GZP4 211 aaPredicted RBP3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 NYXQ9GZU5 481 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 TMEM60Q9H2L4 133 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 POFUT1Q9H488 388 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 PLEKHA4Q9H4M7 779 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 CCDC134Q9H6E4 229 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 BATF3Q9NR55 127 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 BLOC1S4Q9NUP1 217 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 OXSMQ9NWU1 459 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 MCM9Q9NXL9 1143 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 H2AFY2Q9P0M6 372 aaPredicted RBP3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 CNOT7Q9UIV1 285 aaKnown RBP3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 MCM8Q9UJA3 840 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 RASAL2Q9UJF2 1139 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 NFU1Q9UMS0 254 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 SYNPO2Q9UMS6 1093 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 NENFQ9UMX5 172 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 NIP7Q9Y221 180 aaKnown RBP eCLIP3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 PLAAQ9Y263 795 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 UTP11Q9Y3A2 253 aaKnown RBP3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 CEP83Q9Y592 693 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 SPO11Q9Y5K1 396 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 NFS1Q9Y697 457 aa3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 MYH14Q7Z406 1995 aaKnown RBP3.78□□□□□ -1.8
RNU6-55P-201ENST00000411092 GREB1LQ9C091 1923 aaPredicted RBP3.78□□□□□ -1.81
RNU6-55P-201ENST00000411092 ARFGEF1Q9Y6D6 1849 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 PFASO15067 1338 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 UBE4BO95155 1302 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 A0A0A6YYJ9 748 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 KLRG2A4D1S0 409 aaPredicted RBP3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 SMCO2A6NFE2 343 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 PP2D1A8MPX8 630 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 MIF4GDA9UHW6 222 aaKnown RBP3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 KLRF2D3W0D1 207 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 F8VZ95 297 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 O00370 1275 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 PDXKO00764 312 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 LIN7AO14910 233 aaPredicted RBP3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 TBX3O15119 743 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 CETN3O15182 167 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 EPHB6O15197 1021 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 RAD51CO43502 376 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 CYTH3O43739 400 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 CALUO43852 315 aaPredicted RBP3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 MGRN1O60291 552 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 TLR2O60603 784 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 FAM20BO75063 409 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 NOL4O94818 638 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 GGPS1O95749 300 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 PEX11BO96011 259 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 AGTP01019 485 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 FCER1AP12319 257 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 FERP16591 822 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 ATP2A2P16615 1042 aaKnown RBP3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 KLRC1P26715 233 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 ATP5DP30049 168 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 ECHS1P30084 290 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 CXCR5P32302 372 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 ELF1P32519 619 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 KIR2DL3P43628 341 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 CRKLP46109 303 aaKnown RBP3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 GYG1P46976 350 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 KLK7P49862 253 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 ZNF131P52739 623 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 RABGGTBP53611 331 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 HADHBP55084 474 aaKnown RBP3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 INHBEP58166 350 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 PTENP60484 403 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 POLR2FP61218 127 aaKnown RBP3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 DYNLL1P63167 89 aaKnown RBP3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 COASYQ13057 564 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 RAPGEF1Q13905 1077 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 EZH2Q15910 746 aaKnown RBP3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 NFIL3Q16649 462 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 BMT2Q1RMZ1 405 aa3.77□□□□□ -1.81
RNU6-55P-201ENST00000411092 LETM2Q2VYF4 491 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms