RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 DCAF6Q58WW2 860 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 FAM102AQ5T9C2 384 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-205ENST00000409810 RHBDF2Q6PJF5 856 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 TPGS1Q6ZTW0 290 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 TAC4Q86UU9 113 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 XYLT1Q86Y38 959 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 DEFB106AQ8N104 65 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 PIWIL1Q96J94 861 aaKnown RBP11.36□□□□□ -0.59
CHMP3-205ENST00000409810 SLC2A13Q96QE2 648 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 ANP32EQ9BTT0 268 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 BBS2Q9BXC9 721 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 XPO4Q9C0E2 1151 aaKnown RBP11.36□□□□□ -0.59
CHMP3-205ENST00000409810 SPATA6Q9NWH7 488 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-205ENST00000409810 AIPL1Q9NZN9 384 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 MARK1Q9P0L2 795 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 DLGAP2Q9P1A6 1054 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 AGO1Q9UL18 857 aaKnown RBP11.36□□□□□ -0.59
CHMP3-205ENST00000409810 TLR6Q9Y2C9 796 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 ARIH1Q9Y4X5 557 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-205ENST00000409810 WDFY4Q6ZS81 3184 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 CACNA1HO95180 2353 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 MUC6Q6W4X9 2439 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 TYW5A2RUC4 315 aaKnown RBP11.35□□□□□ -0.59
CHMP3-205ENST00000409810 NEDD8-MDP1E9PL57 170 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 LAMTOR5O43504 91 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 GRAP2O75791 330 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 IGLV3-27P01718 113 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 KLKB1P03952 638 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 UNGP13051 313 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-205ENST00000409810 TYRP14679 529 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 TNFAIP3P21580 790 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 MMP8P22894 467 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 OPRD1P41143 372 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 PRKCIP41743 596 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 MATKP42679 507 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 CCR3P51677 355 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 GSCP56915 257 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-205ENST00000409810 KLHL30Q0D2K2 578 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 CLEC16AQ2KHT3 1053 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 TDRD12Q587J7 1177 aaKnown RBP11.35□□□□□ -0.59
CHMP3-205ENST00000409810 SYPL2Q5VXT5 272 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 FSTL4Q6MZW2 842 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 MMS22LQ6ZRQ5 1243 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 ARCQ7LC44 396 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 IRF2BP2Q7Z5L9 587 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 VPS36Q86VN1 386 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 TMEM25Q86YD3 366 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 C1orf210Q8IVY1 113 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 FAM217AQ8IXS0 508 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 SYN2Q92777 582 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-205ENST00000409810 AZIN2Q96A70 460 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 CHFRQ96EP1 664 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 PNKPQ96T60 521 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 C11orf70Q9BRQ4 267 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 IRX2Q9BZI1 471 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-205ENST00000409810 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.35□□□□□ -0.59
CHMP3-205ENST00000409810 ADAM22Q9P0K1 906 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 DEC1Q9P2X7 70 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 SLC12A6Q9UHW9 1150 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 STOML2Q9UJZ1 356 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 LUC7L2Q9Y383 392 aaKnown RBP11.35□□□□□ -0.59
CHMP3-205ENST00000409810 PAXBP1Q9Y5B6 917 aa11.35□□□□□ -0.59
CHMP3-205ENST00000409810 BZW2Q9Y6E2 419 aaKnown RBP11.35□□□□□ -0.59
CHMP3-205ENST00000409810 GOLGA8SH3BPF8 625 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 CACNG3O60359 315 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 ATG13O75143 517 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 EGFP01133 1207 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 IGLV3-25P01717 112 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 CCR1P32246 355 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 RNASE9P60153 205 aaKnown RBP11.34□□□□□ -0.59
CHMP3-205ENST00000409810 ZBED6P86452 979 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 FZD5Q13467 585 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 TAF5Q15542 800 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 GAB4Q2WGN9 574 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 MPPE1Q53F39 396 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 ADGRF1Q5T601 910 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 SPECC1LQ69YQ0 1117 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 GRAMD4Q6IC98 578 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 SND1Q7KZF4 910 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHMP3-205ENST00000409810 PHF13Q86YI8 300 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-205ENST00000409810 ETFBKMTQ8IXQ9 262 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 SPEM1Q8N4L4 309 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 ATP6V0D2Q8N8Y2 350 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 ZNF557Q8N988 423 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-205ENST00000409810 ADAM32Q8TC27 787 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 RNF34Q969K3 372 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 ACDQ96AP0 544 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 SLC39A13Q96H72 371 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 SELENOOQ9BVL4 669 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 HAUS4Q9H6D7 363 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 ARHGEF4Q9NR80 690 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 METTL5Q9NRN9 209 aaKnown RBP11.34□□□□□ -0.59
CHMP3-205ENST00000409810 RBM12Q9NTZ6 932 aaKnown RBP11.34□□□□□ -0.59
CHMP3-205ENST00000409810 DNAJC17Q9NVM6 304 aaKnown RBP11.34□□□□□ -0.59
CHMP3-205ENST00000409810 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHMP3-205ENST00000409810 DDIT4Q9NX09 232 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 CAPN11Q9UMQ6 739 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 FANCMQ8IYD8 2048 aa11.34□□□□□ -0.59
CHMP3-205ENST00000409810 SYNJ2BP-COX16A0A087WUM0 186 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms