RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 NIPAL4Q0D2K0 466 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 BST1Q10588 318 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 OVGP1Q12889 678 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 NAB1Q13506 487 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 DPYSL3Q14195 570 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 USH1GQ495M9 461 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ATP13A4Q4VNC1 1196 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 EFHC1Q5JVL4 640 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TRAPPC3LQ5T215 181 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TEDDM1Q5T9Z0 273 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ARMC3Q5W041 872 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 CCDC62Q6P9F0 684 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 C4orf22Q6V702 233 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 C3orf62Q6ZUJ4 267 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 PODNQ7Z5L7 613 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 PHLDB2Q86SQ0 1253 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 CAND1Q86VP6 1230 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 KIAA0319LQ8IZA0 1049 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ST13P4Q8IZP2 240 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 CCDC24Q8N4L8 307 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 CCDC33Q8N5R6 958 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 METTL25Q8N6Q8 603 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 KLHL23Q8NBE8 558 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 PYROXD1Q8WU10 500 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SLC7A3Q8WY07 619 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 LENG1Q96BZ8 264 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 MAML3Q96JK9 1138 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 GBP5Q96PP8 586 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 UHRF1Q96T88 793 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 SORT1Q99523 831 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SLX1AQ9BQ83 275 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SENP6Q9GZR1 1112 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 SDCBP2Q9H190 292 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 VPS37BQ9H9H4 285 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SPC25Q9HBM1 224 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TBCCD1Q9NVR7 557 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 C6orf203Q9P0P8 240 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 RIMS3Q9UJD0 308 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SOX13Q9UN79 622 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 BCS1LQ9Y276 419 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 RPS6KL1Q9Y6S9 549 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 A0A0G2JND7 137 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 BCLAF3A2AJT9 711 aaKnown RBP3.25□□□□□ -1.89
CUL3-204ENST00000409777 F8VP50 259 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 SPECC1L-ADORA2AF8WAN1 911 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 LRCH4O75427 683 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 TOMM70O94826 608 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 MT-ND3P03897 115 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 PYGLP06737 847 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 C8BP07358 591 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 TPSB2P20231 275 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 ARL2P36404 184 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 ETFBP38117 255 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 SSR1P43307 286 aaKnown RBP3.25□□□□□ -1.89
CUL3-204ENST00000409777 RPL5P46777 297 aaKnown RBP3.25□□□□□ -1.89
CUL3-204ENST00000409777 RPIAP49247 311 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 PEX3P56589 373 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 ZNF200P98182 395 aaPredicted RBP3.25□□□□□ -1.89
CUL3-204ENST00000409777 KRT76Q01546 638 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 OTUD4Q01804 1114 aaKnown RBP3.25□□□□□ -1.89
CUL3-204ENST00000409777 RFTN1Q14699 578 aaPredicted RBP3.25□□□□□ -1.89
CUL3-204ENST00000409777 TPSAB1Q15661 275 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 TBCELQ5QJ74 424 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 FKBP1CQ5VVH2 108 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 ATG16L1Q676U5 607 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 SLC9A4Q6AI14 798 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 PRPF39Q86UA1 669 aaKnown RBP3.25□□□□□ -1.89
CUL3-204ENST00000409777 LDHDQ86WU2 507 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 UNC45BQ8IWX7 931 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 RTKN2Q8IZC4 609 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 ADGRF2Q8IZF7 708 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 CPSF7Q8N684 471 aaKnown RBP3.25□□□□□ -1.89
CUL3-204ENST00000409777 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.25□□□□□ -1.89
CUL3-204ENST00000409777 SHKBP1Q8TBC3 707 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 ACTL9Q8TC94 416 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 ADAMTS16Q8TE57 1224 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 CHURC1Q8WUH1 139 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 ZNF606Q8WXB4 792 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 FOXJ1Q92949 421 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 STMN2Q93045 179 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 MCUR1Q96AQ8 359 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 MCRS1Q96EZ8 462 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 BIRC8Q96P09 236 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 PLEKHG4BQ96PX9 1271 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 FAM111AQ96PZ2 611 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 C11orf70Q9BRQ4 267 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 TMEM121Q9BTD3 319 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 MRPS26Q9BYN8 205 aaKnown RBP3.25□□□□□ -1.89
CUL3-204ENST00000409777 KLHL4Q9C0H6 718 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 C12orf65Q9H3J6 166 aaKnown RBP3.25□□□□□ -1.89
CUL3-204ENST00000409777 FAM96AQ9H5X1 160 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 THAP1Q9NVV9 213 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 MTMR10Q9NXD2 777 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 CCNL1Q9UK58 526 aaPredicted RBP3.25□□□□□ -1.89
CUL3-204ENST00000409777 CDH7Q9ULB5 785 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 TELO2Q9Y4R8 837 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 NUB1Q9Y5A7 615 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 COL4A5P29400 1685 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 IGKV6D-21A0A0A0MT36 114 aa3.25□□□□□ -1.89
CUL3-204ENST00000409777 PRSS51A0A1B0GVH4 220 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms