RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 HOXB6P17509 224 aaKnown RBP5.14□□□□□ -1.59
CLK1-203ENST00000409769 CASP5P51878 434 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 TBX4P57082 545 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 DAG1Q14118 895 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 ARHGEF7Q14155 803 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 PROSER3Q2NL68 480 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 MTHFD1LQ6UB35 978 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 ZDHHC24Q6UX98 284 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 YAF2Q8IY57 180 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 ABRAQ8N0Z2 381 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 RP9Q8TA86 221 aaKnown RBP5.14□□□□□ -1.59
CLK1-203ENST00000409769 DENND1AQ8TEH3 1009 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 IPCEF1Q8WWN9 437 aaPredicted RBP5.14□□□□□ -1.59
CLK1-203ENST00000409769 RAPGEF4Q8WZA2 1011 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 ARNT2Q9HBZ2 717 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 GLOD4Q9HC38 313 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 DKK4Q9UBT3 224 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 GABRQQ9UN88 632 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 TBC1D30Q9Y2I9 924 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 MRPS17Q9Y2R5 130 aaKnown RBP5.14□□□□□ -1.59
CLK1-203ENST00000409769 LRP6O75581 1613 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 ZBED9Q6R2W3 1325 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 SHANK3Q9BYB0 1731 aa5.14□□□□□ -1.59
CLK1-203ENST00000409769 ADAMTS7Q9UKP4 1686 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 A1L4Q6 167 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 RHPN2P1A8MT19 583 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 PQBP1O60828 265 aaKnown RBP5.13□□□□□ -1.59
CLK1-203ENST00000409769 TUBB4AP04350 444 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 ANXA2P07355 339 aaKnown RBP5.13□□□□□ -1.59
CLK1-203ENST00000409769 IL6RP08887 468 aaPredicted RBP5.13□□□□□ -1.59
CLK1-203ENST00000409769 BTF3P20290 206 aaKnown RBP5.13□□□□□ -1.59
CLK1-203ENST00000409769 ACVR2AP27037 513 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 HSPA1LP34931 641 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 PIK3CBP42338 1070 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 BCAT1P54687 386 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 SP2Q02086 613 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 ZNF543Q08ER8 600 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 CCNIQ14094 377 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 ZNF750Q32MQ0 723 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 TMEM119Q4V9L6 283 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 CERCAMQ5T4B2 595 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 FCRL6Q6DN72 434 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 OSCP1Q8WVF1 389 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 PPP2R3CQ969Q6 453 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 KRTAP1-5Q9BYS1 174 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 PARP4Q9UKK3 1724 aaKnown RBP5.13□□□□□ -1.59
CLK1-203ENST00000409769 ZNF521Q96K83 1311 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 PLEKHG2Q9H7P9 1386 aa5.13□□□□□ -1.59
CLK1-203ENST00000409769 LRRC37A3O60309 1634 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 AQP7P3A6NL99 342 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 CLCA1A8K7I4 914 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 F8W8V4 182 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 M0R3H8 397 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 PPP6CO00743 305 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 APAF1O14727 1248 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 TP73O15350 636 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 CD3EAPO15446 510 aaKnown RBP5.12□□□□□ -1.59
CLK1-203ENST00000409769 RRP9O43818 475 aaKnown RBP5.12□□□□□ -1.59
CLK1-203ENST00000409769 MT-ND5P03915 603 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 KRT18P05783 430 aaKnown RBP5.12□□□□□ -1.59
CLK1-203ENST00000409769 MYL1P05976 194 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 PDHA1P08559 390 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 HMOX1P09601 288 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 JUPP14923 745 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 IL1R2P27930 398 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 PRKAR2BP31323 418 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 LIPAP38571 399 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 TM4SF4P48230 202 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 CPT1AP50416 773 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 TIAL1Q01085 375 aaKnown RBP eCLIP5.12□□□□□ -1.59
CLK1-203ENST00000409769 SLC29A2Q14542 456 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 TREML2Q5T2D2 321 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 SULT6B1Q6IMI4 303 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 DPP9Q86TI2 863 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 CCDC146Q8IYE0 955 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 IZUMO1Q8IYV9 350 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 NGEFQ8N5V2 710 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 RNF152Q8N8N0 203 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 FANCBQ8NB91 859 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 GLG1Q92896 1179 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 SNX22Q96L94 193 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 NAA15Q9BXJ9 866 aaKnown RBP5.12□□□□□ -1.59
CLK1-203ENST00000409769 PNPLA8Q9NP80 782 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 TRIM36Q9NQ86 728 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 SH3BP4Q9P0V3 963 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 WDR17Q8IZU2 1322 aa5.12□□□□□ -1.59
CLK1-203ENST00000409769 AREL1O15033 823 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 PMM2O15305 246 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 RASSF9O75901 435 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 A1BGP04217 495 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 PRKCBP05771 671 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 TMPOP42166 694 aaKnown RBP5.11□□□□□ -1.59
CLK1-203ENST00000409769 CARSP49589 748 aaKnown RBP5.11□□□□□ -1.59
CLK1-203ENST00000409769 PRKAG1P54619 331 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 IFIT5Q13325 482 aaKnown RBP5.11□□□□□ -1.59
CLK1-203ENST00000409769 PRAMEF17Q5VTA0 474 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 UNC13DQ70J99 1090 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 PARS2Q7L3T8 475 aaKnown RBP5.11□□□□□ -1.59
CLK1-203ENST00000409769 YTHDF3Q7Z739 585 aaKnown RBP5.11□□□□□ -1.59
CLK1-203ENST00000409769 SPARTQ8N0X7 666 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms