RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 MAP9Q49MG5 647 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 SHC4Q6S5L8 630 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 PIK3AP1Q6ZUJ8 805 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 TTC30AQ86WT1 665 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 ACRBPQ8NEB7 543 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 IPO4Q8TEX9 1081 aaKnown RBP4.77□□□□□ -1.65
PMS1-203ENST00000409593 AKAP1Q92667 903 aaKnown RBP eCLIP4.77□□□□□ -1.65
PMS1-203ENST00000409593 MUL1Q969V5 352 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 C18orf8Q96DM3 657 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 SLC39A10Q9ULF5 831 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 CCDC187A0A096LP49 1063 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 TTC34A8MYJ7 566 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 HNRNPDLO14979 420 aaKnown RBP4.76□□□□□ -1.65
PMS1-203ENST00000409593 INPPL1O15357 1258 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 MATN1P21941 496 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 MMP8P22894 467 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 DUSP1P28562 367 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 PLCD1P51178 756 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 RAB30Q15771 203 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 NANOGP1Q8N7R0 232 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.76□□□□□ -1.65
PMS1-203ENST00000409593 DEPTORQ8TB45 409 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 SCARB1Q8WTV0 552 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 FCRL5Q96RD9 977 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 ELAC2Q9BQ52 826 aaKnown RBP4.76□□□□□ -1.65
PMS1-203ENST00000409593 EPS8L2Q9H6S3 715 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 TMEM8AQ9HCN3 771 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 NLRC4Q9NPP4 1024 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 TM7SF3Q9NS93 570 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 ASNSD1Q9NWL6 643 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 CDC23Q9UJX2 597 aa4.76□□□□□ -1.65
PMS1-203ENST00000409593 SPATA31A1Q5TZJ5 1347 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 ZNF521Q96K83 1311 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 PNMA6EA0A0J9YXQ4 647 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 RRHO14718 337 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 CYP19A1P11511 503 aaPredicted RBP4.75□□□□□ -1.65
PMS1-203ENST00000409593 NDUFS1P28331 727 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 HOXD9P28356 352 aaPredicted RBP4.75□□□□□ -1.65
PMS1-203ENST00000409593 PTGER1P34995 402 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 CSHL1Q14406 222 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 FAM110CQ1W6H9 321 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 SLC9C1Q4G0N8 1177 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 PXDC1Q5TGL8 231 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 XRRA1Q6P2D8 792 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 TFAP2DQ7Z6R9 452 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 OVCA2Q8WZ82 227 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 PIGKQ92643 395 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 PMM1Q92871 262 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 NUDT22Q9BRQ3 303 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 RNF26Q9BY78 433 aaPredicted RBP4.75□□□□□ -1.65
PMS1-203ENST00000409593 ARFGAP3Q9NP61 516 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 NECTIN3Q9NQS3 549 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 FSCN3Q9NQT6 498 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 FBXO28Q9NVF7 368 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 ELOVL5Q9NYP7 299 aa4.75□□□□□ -1.65
PMS1-203ENST00000409593 C16orf96A6NNT2 1141 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 PPEF2O14830 753 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 PIP5K1BO14986 540 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 CTIFO43310 598 aaKnown RBP4.74□□□□□ -1.65
PMS1-203ENST00000409593 SLC8A1P32418 973 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 ID2Q02363 134 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 MTA1Q13330 715 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 GAB1Q13480 694 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 CBFBQ13951 182 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 STARD3Q14849 445 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 SYCP2LQ5T4T6 812 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 PAPD7Q5XG87 772 aaKnown RBP4.74□□□□□ -1.65
PMS1-203ENST00000409593 ARL6IP4Q66PJ3 421 aaKnown RBP4.74□□□□□ -1.65
PMS1-203ENST00000409593 C11orf87Q6NUJ2 197 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 SYTL1Q8IYJ3 562 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 OR52L2PQ8NGH6 319 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 GJA10Q969M2 543 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 SIGLEC11Q96RL6 698 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 SCNM1Q9BWG6 230 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 TM2D2Q9BX73 214 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 STK33Q9BYT3 514 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 CDCP1Q9H5V8 836 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 HELLSQ9NRZ9 838 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 TMEM184CQ9NVA4 438 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 MTMR4Q9NYA4 1195 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 SEMA5BQ9P283 1151 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 CA14Q9ULX7 337 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 DTNAQ9Y4J8 743 aa4.74□□□□□ -1.65
PMS1-203ENST00000409593 SIRT4Q9Y6E7 314 aaPredicted RBP4.74□□□□□ -1.65
PMS1-203ENST00000409593 PRYO14603 147 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 PLA2G6O60733 806 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 MOSPD3O75425 235 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 PLAUP00749 431 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 ST6GAL1P15907 406 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 RPS13P62277 151 aaKnown RBP4.73□□□□□ -1.65
PMS1-203ENST00000409593 CFHR1Q03591 330 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 BTKQ06187 659 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 MSANTD2Q6P1R3 559 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 ACSM6Q6P461 480 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 KYAT3Q6YP21 454 aaKnown RBP4.73□□□□□ -1.65
PMS1-203ENST00000409593 SENP7Q9BQF6 1050 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 CHST12Q9NRB3 414 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 MAGED2Q9UNF1 606 aaPredicted RBP4.73□□□□□ -1.65
PMS1-203ENST00000409593 PCDH17O14917 1159 aa4.73□□□□□ -1.65
PMS1-203ENST00000409593 NPC1O15118 1278 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 232.6 ms