RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 STOML2Q9UJZ1 356 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 AGO1Q9UL18 857 aaKnown RBP15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 YJEFN3A6XGL0 299 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 E7ENQ6 273 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 RNF225M0QZC1 329 aaPredicted RBP15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 SLC30A4O14863 429 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 MDM4O15151 490 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 ADAM23O75077 832 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 ZNF217O75362 1048 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 ERCC5P28715 1186 aaPredicted RBP15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 RPL34P49207 117 aaKnown RBP15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 ATXN1P54253 815 aaKnown RBP15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 DAOAP59103 153 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 MESP2Q0VG99 397 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 EIF4HQ15056 248 aaKnown RBP15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 TPD52L1Q16890 204 aaPredicted RBP15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 ADGRF1Q5T601 910 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 PMF1Q6P1K2 205 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 GBP6Q6ZN66 633 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 BHLHA9Q7RTU4 235 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 DENND1CQ8IV53 801 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 FMNL3Q8IVF7 1028 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 C12orf50Q8NA57 414 aaPredicted RBP15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 MDGA1Q8NFP4 955 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 GABRG3Q99928 467 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 INTS2Q9H0H0 1204 aaKnown RBP15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 THAP9Q9H5L6 903 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 POLR3BQ9NW08 1133 aaPredicted RBP15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 BCCIPQ9P287 314 aaKnown RBP eCLIP15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 ATG2BQ96BY7 2078 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 DCHS1Q96JQ0 3298 aa15.19■□□□□ 0.02
NIF3L1-205ENST00000409588 M0QYV0 167 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 TULP2O00295 520 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 IRAK2O43187 625 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 LCP1P13796 627 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 GBP1P32455 592 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 P2RY2P41231 377 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 GPD2P43304 727 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 SNX16P57768 344 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 RING1Q06587 406 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 MPP7Q5T2T1 576 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 FYB2Q5VWT5 728 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 NUGGCQ68CJ6 796 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 PMS2CLQ68D20 193 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 MSANTD2Q6P1R3 559 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 TRIM65Q6PJ69 517 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 SLC36A4Q6YBV0 504 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 CHPFQ8IZ52 775 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 DDI1Q8WTU0 396 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 RNF166Q96A37 237 aaPredicted RBP15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 MED15Q96RN5 788 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 DDX50Q9BQ39 737 aaKnown RBP15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 CLSTN2Q9H4D0 955 aa15.18■□□□□ 0.02
NIF3L1-205ENST00000409588 MYOFQ9NZM1 2061 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 BCLAF3A2AJT9 711 aaKnown RBP15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 LTFP02788 710 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 HMBSP08397 361 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 KRT5P13647 590 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 HOXB2P14652 356 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 HOXC13P31276 330 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 MPLP40238 635 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 SLC11A2P49281 568 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 NNTQ13423 1086 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 EXOC3L4Q17RC7 722 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 LPCAT2Q7L5N7 544 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 METTL3Q86U44 580 aaKnown RBP15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 CREBRFQ8IUR6 639 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 ARHGEF19Q8IW93 802 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 PGBD3Q8N328 593 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 ZNF606Q8WXB4 792 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 TMA16Q96EY4 203 aaKnown RBP15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 KREMEN1Q96MU8 473 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 TMEM51Q9NW97 253 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 APEX2Q9UBZ4 518 aa15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.17■□□□□ 0.02
NIF3L1-205ENST00000409588 MYO16Q9Y6X6 1858 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 TCRBV21S2A2A0A5A6 115 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 PRRT4C9JH25 899 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 CAVIN2O95810 425 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 BRD2P25440 801 aaKnown RBP15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 HOXD12P35452 270 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 STARD3Q14849 445 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 AASDHQ4L235 1098 aaPredicted RBP15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 ANKS1BQ7Z6G8 1248 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 TMEM110Q86TL2 294 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 SFTPA1Q8IWL2 248 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 HMGB4Q8WW32 186 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 EDEM1Q92611 657 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 KAT5Q92993 513 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 PIWIL1Q96J94 861 aaKnown RBP15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 ZSWIM1Q9BR11 485 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 TPSD1Q9BZJ3 242 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 THAP10Q9P2Z0 257 aaPredicted RBP15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 CACNA1AO00555 2505 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 CEP250Q9BV73 2442 aa15.16■□□□□ 0.02
NIF3L1-205ENST00000409588 KIAA1549LQ6ZVL6 1849 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 A0A1W2PQF6 199 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 DCLK1O15075 740 aa15.15■□□□□ 0.02
NIF3L1-205ENST00000409588 AP5Z1O43299 807 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms