RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 ETNK2Q9NVF9 386 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 UTP6Q9NYH9 597 aaKnown RBP16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 PRKAG2Q9UGJ0 569 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 KDM3BQ7LBC6 1761 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 SLC12A8A0AV02 714 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 TM9SF1O15321 606 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 RHOBTB1O94844 696 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 TRUB2O95900 331 aaKnown RBP16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 PSMB4P28070 264 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 PHEXP78562 749 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 BTKQ06187 659 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 ERBB2P04626 1255 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 CD48P09326 243 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 GOT1P17174 413 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 ATN1P54259 1190 aaPredicted RBP16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 APOPT1Q96IL0 206 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 APBA2Q99767 749 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 PHGDHO43175 533 aaKnown RBP16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 STMN1P16949 149 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 FAM83EQ2M2I3 478 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 SPOCK2Q92563 424 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 RNF157Q96PX1 679 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 CD274Q9NZQ7 290 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 DCDC2Q9UHG0 476 aa16.95■□□□□ 0.3
PTPRN2-205ENST00000409483 CFHP08603 1231 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 CTXN3Q4LDR2 81 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 ISLR2Q6UXK2 745 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 OR52K1Q8NGK4 314 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 CXorf38Q8TB03 319 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 TFAP2BQ92481 460 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 SNX19Q92543 992 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 SPATA17Q96L03 361 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 GPR20Q99678 358 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 MRPL45Q9BRJ2 306 aaKnown RBP16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 TKTL2Q9H0I9 626 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 PSMD3O43242 534 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 PSEN2P49810 448 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 FLOT2Q14254 428 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 LBX2Q6XYB7 198 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 BBS12Q6ZW61 710 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 LINC00523Q86TU6 105 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 TSPAN17Q96FV3 270 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 hCG_2014768A0A024R1R8 64 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 FAM237BA0A1B0GVD1 139 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 LHX1P48742 406 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 SERPINB8P50452 374 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 TAF5Q15542 800 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 GPR63Q9BZJ6 419 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 SLC8A2Q9UPR5 921 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 AP3B1O00203 1094 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 HMOX2P30519 316 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 RTP1P59025 263 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 SCUBE1Q8IWY4 988 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 MSL3Q8N5Y2 521 aaKnown RBP16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 NAT9Q9BTE0 207 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 ACOT9Q9Y305 439 aa16.94■□□□□ 0.3
PTPRN2-205ENST00000409483 GPR25O00155 361 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 BUD23O43709 281 aaKnown RBP16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 PTPN4P29074 926 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 HARS2P49590 506 aaKnown RBP16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 MMP14P50281 582 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 NLGN2Q8NFZ4 835 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 GIPC2Q8TF65 315 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 USP13Q92995 863 aaPredicted RBP16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 TRIM15Q9C019 465 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 PACSIN3Q9UKS6 424 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 ZNF214Q9UL59 606 aaPredicted RBP16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 A0A096LPK6 155 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 ATP6V1B1P15313 513 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 SUGP1Q8IWZ8 645 aaKnown RBP16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 CALML6Q8TD86 181 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 MECRQ9BV79 373 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 PRDM12Q9H4Q4 367 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 RRAGCQ9HB90 399 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 LRRC4CQ9HCJ2 640 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 IL1RAPL1Q9NZN1 696 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 TIMM44O43615 452 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 PDE5AO76074 875 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 TMED1Q13445 227 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 FSCN1Q16658 493 aaKnown RBP16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 ADGRA3Q8IWK6 1321 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 SH3GL2Q99962 352 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 DHX33Q9H6R0 707 aaKnown RBP16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 CASS4Q9NQ75 786 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 TUBGCP4Q9UGJ1 667 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 KIF13AQ9H1H9 1805 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
PTPRN2-205ENST00000409483 GRIN3BO60391 1043 aa16.92■□□□□ 0.3
PTPRN2-205ENST00000409483 GEMP55040 296 aa16.92■□□□□ 0.3
PTPRN2-205ENST00000409483 MTFR1Q15390 333 aa16.92■□□□□ 0.3
PTPRN2-205ENST00000409483 MAPRE1Q15691 268 aaKnown RBP16.92■□□□□ 0.3
PTPRN2-205ENST00000409483 RNF217Q8TC41 542 aa16.92■□□□□ 0.3
PTPRN2-205ENST00000409483 DRC3Q9H069 523 aa16.92■□□□□ 0.3
PTPRN2-205ENST00000409483 ARHGAP26Q9UNA1 814 aa16.92■□□□□ 0.3
PTPRN2-205ENST00000409483 LRCH4O75427 683 aa16.92■□□□□ 0.3
PTPRN2-205ENST00000409483 PTPN1P18031 435 aaKnown RBP16.92■□□□□ 0.3
PTPRN2-205ENST00000409483 CCR1P32246 355 aa16.92■□□□□ 0.3
PTPRN2-205ENST00000409483 VHLP40337 213 aa16.92■□□□□ 0.3
PTPRN2-205ENST00000409483 TUBP50607 506 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms