RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SIRPGQ9P1W8 387 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 PPARGC1AQ9UBK2 798 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 PRPF19Q9UMS4 504 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 LCTP09848 1927 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 TRIM64A6NGJ6 449 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 KLRF2D3W0D1 207 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 FAM47E-STBD1D6RA91 191 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 FOXN3O00409 490 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 DPYSL4O14531 572 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 ATMINO43313 823 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 PSTPIP1O43586 416 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 SLC37A4O43826 429 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 SNNO75324 88 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 FARP2O94887 1054 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 H6PDO95479 791 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 BMP3P12645 472 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 STAT3P40763 770 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 SNAP25P60880 206 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 ADGRE1Q14246 886 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 GRAMD1BQ3KR37 738 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 ZBED5Q49AG3 693 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 LINC00299Q6ZSB3 139 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 HAUS6Q7Z4H7 955 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 GPR180Q86V85 440 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 TRIM50Q86XT4 487 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 PALB2Q86YC2 1186 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 RIOX2Q8IUF8 465 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 CPXCR1Q8N123 301 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 FBXW8Q8N3Y1 598 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 FBXO27Q8NI29 283 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 DCAKDQ8WVC6 231 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 MBOAT7Q96N66 472 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 GCNAQ96QF7 691 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 PRPF18Q99633 342 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 NUP85Q9BW27 656 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 DRC3Q9H069 523 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 MROH8Q9H579 483 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 RIOX1Q9H6W3 641 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 CLK4Q9HAZ1 481 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 RAVER2Q9HCJ3 691 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 TMEM9Q9P0T7 183 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 CDH22Q9UJ99 828 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 PCDHA12Q9UN75 941 aa10.98□□□□□ -0.65
NIF3L1-204ENST00000409357 FAM237BA0A1B0GVD1 139 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 CAPN8A6NHC0 703 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 PFDN6O15212 129 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 SLC22A1O15245 554 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 LPXNO60711 386 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 SPAG6O75602 509 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 FBXO21O94952 628 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 FUCA1P04066 466 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 PABPC1P11940 636 aaKnown RBP10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 CCR3P51677 355 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 HNRNPFP52597 415 aaKnown RBP10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 COPAP53621 1224 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 C21orf59P57076 290 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 ATP6V0D1P61421 351 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 DSG2Q14126 1118 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 KCTD21Q4G0X4 260 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 PRPF38BQ5VTL8 546 aaKnown RBP10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 LHX8Q68G74 356 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 SPOPLQ6IQ16 392 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 ARCQ7LC44 396 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 DPP9Q86TI2 863 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 PRUNE1Q86TP1 453 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 ALYREFQ86V81 257 aaKnown RBP10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 CHERPQ8IWX8 916 aaKnown RBP10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 PEX5LQ8IYB4 626 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 KATNAL2Q8IYT4 538 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 CENPSQ8N2Z9 138 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 PTCD2Q8WV60 388 aaKnown RBP10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 CMTM5Q96DZ9 223 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 TRIM11Q96F44 468 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 GMCL1Q96IK5 515 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 CLPTM1LQ96KA5 538 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 CCDC138Q96M89 665 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 NSMCE3Q96MG7 304 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 ZNF641Q96N77 438 aaPredicted RBP10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 TMEM47Q9BQJ4 181 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 C10orf88Q9H8K7 445 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 SLC38A10Q9HBR0 1119 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 GID8Q9NWU2 228 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 ARMCX1Q9P291 453 aa10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 NOCTQ9UK39 431 aaKnown RBP10.97□□□□□ -0.65
NIF3L1-204ENST00000409357 CYP3A7-CYP3A51PA0A087WV96 503 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 TMEM114B3SHH9 223 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 H3BNH8 94 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 TGFB1I1O43294 461 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 MT-ND3P03897 115 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 CYP3A7P24462 503 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 NFKBIAP25963 317 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 L1CAMP32004 1257 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 PTPN7P35236 360 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 CLK2P49760 499 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 ESRRGP62508 458 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 FAAP100Q0VG06 881 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 PDIA2Q13087 525 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 DPYSQ14117 519 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 RABGAP1LQ5R372 815 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 PRAMEF19Q5SWL8 479 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms