RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 AGPAT5Q9NUQ2 364 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 KIAA1522Q9P206 1035 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 GGT7Q9UJ14 662 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 NUDT5Q9UKK9 219 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 CDY1Q9Y6F8 540 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D3DA0A087WVF3 549 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D3IA0A087WXS9 549 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D3EA0A087X179 549 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D3KA0A087X1G2 549 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 A0A088AWK7 358 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 A0A0A6YYK5 440 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D3FA6NER0 549 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D3LB9A6J9 549 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 CACNB4O00305 520 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D4O60343 1298 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 MAGEC1O60732 1142 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 EOMESO95936 686 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SLC10A3P09131 477 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D3HP0C7X1 549 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF10P21506 573 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 BRCC3P46736 316 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SMAD3P84022 425 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 BTKQ06187 659 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TEDDM1Q5T9Z0 273 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 AGAP9Q5VTM2 703 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SDHAF4Q5VUM1 108 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D3GQ6DHY5 549 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D3CQ6IPX1 549 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 LCA5Q86VQ0 697 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D3Q8IZP1 549 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 CLYBLQ8N0X4 340 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 B3GALNT2Q8NCR0 500 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ING5Q8WYH8 240 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 KAT2BQ92831 832 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 CASP10Q92851 521 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 RBM15Q96T37 977 aaKnown RBP eCLIP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 KRCC1Q9NPI7 259 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 PCMTD2Q9NV79 361 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 BAIAP2L1Q9UHR4 511 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 EIF3LQ9Y262 564 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 C2CD2Q9Y426 696 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 CNTNAP1P78357 1384 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SYCE1LA8MT33 242 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 UBXN8O00124 270 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 MEIS2O14770 477 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SEC31AO94979 1220 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 HSPA1AP0DMV8 641 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 HSPA1BP0DMV9 641 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 GNSP15586 552 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 MMP13P45452 471 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 IFT88Q13099 833 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TRIM60Q495X7 471 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SCUBE3Q8IX30 993 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 GBP7Q8N8V2 638 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 DNAJC1Q96KC8 554 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 MTMR9Q96QG7 549 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TBL1YQ9BQ87 522 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ZFP14Q9HCL3 533 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 KCNMB3Q9NPA1 279 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 IARS2Q9NSE4 1012 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ADAM28Q9UKQ2 775 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 FAM32AQ9Y421 112 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ADGRG1Q9Y653 693 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 A8MX80 341 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 IGF2BP3O00425 579 aaKnown RBP eCLIP5.15□□□□□ -1.58
SCN3A-203ENST00000409101 DNM1LO00429 736 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 TRDMT1O14717 391 aaKnown RBP5.15□□□□□ -1.58
SCN3A-203ENST00000409101 SCAMP3O14828 347 aaKnown RBP5.15□□□□□ -1.58
SCN3A-203ENST00000409101 SYN3O14994 580 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 ZBTB39O15060 712 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 ONECUT3O60422 494 aaPredicted RBP5.15□□□□□ -1.58
SCN3A-203ENST00000409101 KRT16P08779 473 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 PNMA6AP0CW24 399 aaPredicted RBP5.15□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF7P17097 686 aaPredicted RBP5.15□□□□□ -1.58
SCN3A-203ENST00000409101 NR1D1P20393 614 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 GPC1P35052 558 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 PTPN7P35236 360 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 CDC16Q13042 620 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 USP4Q13107 963 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 MED21Q13503 144 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 DDX39BQ13838 428 aaKnown RBP5.15□□□□□ -1.58
SCN3A-203ENST00000409101 INAVAQ3KP66 663 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 TFDP3Q5H9I0 405 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 CACHD1Q5VU97 1274 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 FAM47EQ6ZV65 393 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 PRPF39Q86UA1 669 aaKnown RBP5.15□□□□□ -1.58
SCN3A-203ENST00000409101 CCNJLQ8IV13 435 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 EMC1Q8N766 993 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 SPPL2BQ8TCT7 592 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 MIPOL1Q8TD10 442 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 GPR152Q8TDT2 470 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 PPP1R36Q96LQ0 422 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 SEMA6BQ9H3T3 888 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 ATP13A3Q9H7F0 1226 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 YY1AP1Q9H869 796 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 DEC1Q9P2X7 70 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 SAE1Q9UBE0 346 aaPredicted RBP5.15□□□□□ -1.58
SCN3A-203ENST00000409101 Q9Y3F1 56 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 ALG6Q9Y672 507 aa5.15□□□□□ -1.58
SCN3A-203ENST00000409101 PER2O15055 1255 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms