RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SNRNP27Q8WVK2 155 aaKnown RBP5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 PPP2R3CQ969Q6 453 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 FKBP10Q96AY3 582 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 WDR24Q96S15 920 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 PTDSS2Q9BVG9 487 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 AGXT2Q9BYV1 514 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 CXorf36Q9H7Y0 433 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 IL17RBQ9NRM6 502 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 PI4KBQ9UBF8 816 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 DNAJB11Q9UBS4 358 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 C19orf53Q9UNZ5 99 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 SLC45A1Q9Y2W3 748 aa5.58□□□□□ -1.52
HMGB1P13-201ENST00000406019 CCDC196A0A1B0GTZ2 297 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 DYTNA2CJ06 578 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 F5H0A9 414 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 J3KTA2 159 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 SRGAP2O75044 1071 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 TAF5LO75529 589 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 ERBB2P04626 1255 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 CNPP09543 421 aaKnown RBP5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 DLGAP5Q15398 846 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 SMAD1Q15797 465 aaKnown RBP5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 BTBD16Q32M84 506 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 RINT1Q6NUQ1 792 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 C16orf54Q6UWD8 224 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 RRAGAQ7L523 313 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 MAVSQ7Z434 540 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 DTX2Q86UW9 622 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 CCDC89Q8N998 374 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 MBD3L2Q8NHZ7 208 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 DNAJB14Q8TBM8 379 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 ADAMTS18Q8TE60 1221 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 RFFLQ8WZ73 363 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 CENPIQ92674 756 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 SARAFQ96BY9 339 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 GRAMD1AQ96CP6 724 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 RRP36Q96EU6 259 aaKnown RBP5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 ALG8Q9BVK2 526 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 TPSD1Q9BZJ3 242 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 NDRG4Q9ULP0 352 aaKnown RBP5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 CNTN6Q9UQ52 1028 aa5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 MRPS17Q9Y2R5 130 aaKnown RBP5.57□□□□□ -1.52
HMGB1P13-201ENST00000406019 PNMA6EA0A0J9YXQ4 647 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 WIPF3A6NGB9 483 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 PPM1DO15297 605 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 CBFA2T3O75081 653 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 PROP1O75360 226 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 CSF1RP07333 972 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 TIAL1Q01085 375 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 SLC12A1Q13621 1099 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 LAYNQ6UX15 382 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 NEK10Q6ZWH5 1172 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 TMEM57Q8N5G2 664 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 ABHD5Q8WTS1 349 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 WDR60Q8WVS4 1066 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 HVCN1Q96D96 273 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 ELAC1Q9H777 363 aaKnown RBP5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 PREBQ9HCU5 417 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 ASB6Q9NWX5 421 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 CLIC5Q9NZA1 410 aa5.56□□□□□ -1.52
HMGB1P13-201ENST00000406019 COL15A1P39059 1388 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 FER1L4A9Z1Z3 1794 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 A0A087X0M5 115 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 A0A1B0GX30 115 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 A6NCN8 305 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 FAM90A20PA6NIJ5 464 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 EFCAB8A8MWE9 144 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 E7EVH7 732 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 RGS10O43665 173 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 RBMXL2O75526 392 aaKnown RBP5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 URI1O94763 535 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 TFRCP02786 760 aaKnown RBP5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 RXRAP19793 462 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 HTR7P34969 479 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 MCM2P49736 904 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 ELLP55199 621 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 PDE1CQ14123 709 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 SPATA1Q5VX52 437 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 C4orf50Q6ZRC1 276 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 BRINP3Q76B58 766 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 SPARTQ8N0X7 666 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 CEP70Q8NHQ1 597 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 C3orf49Q96BT1 292 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 REEP2Q9BRK0 252 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 GBA2Q9HCG7 927 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 SERTAD4Q9NUC0 356 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 EHD3Q9NZN3 535 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 DERAQ9Y315 318 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 LMTK3Q96Q04 1460 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 PCSK5Q92824 1860 aa5.55□□□□□ -1.52
HMGB1P13-201ENST00000406019 SPATA31A6Q5VVP1 1343 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 K7ENM7 598 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 AGPSO00116 658 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 PPP6R2O75170 966 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 RPP40O75818 363 aaKnown RBP5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 HGFP14210 728 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 DRD4P21917 467 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 AKT1P31749 480 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 UQCRC1P31930 480 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 LIPAP38571 399 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms