RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PTPRFP10586 1907 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 HACD1B0YJ81 288 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 MAP3K7O43318 606 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 CNMDO75829 334 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 ALDH1A2O94788 518 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 PGK2P07205 417 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 SCNN1AP37088 669 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 PSEN1P49768 467 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 NAB1Q13506 487 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 NBPF20Q3BBV1 942 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 HEATR6Q6AI08 1181 aaKnown RBP11.09□□□□□ -0.63
CLIP4-204ENST00000404424 TRMT10BQ6PF06 316 aaKnown RBP11.09□□□□□ -0.63
CLIP4-204ENST00000404424 GADL1Q6ZQY3 521 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 MARK2Q7KZI7 788 aaKnown RBP11.09□□□□□ -0.63
CLIP4-204ENST00000404424 TTC30AQ86WT1 665 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 FBXO16Q8IX29 292 aaPredicted RBP11.09□□□□□ -0.63
CLIP4-204ENST00000404424 CENPIQ92674 756 aaPredicted RBP11.09□□□□□ -0.63
CLIP4-204ENST00000404424 CDKL2Q92772 493 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 RNPEPQ9H4A4 650 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 DNAJC25-GNG10A0A024R161 153 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 CCDC189A1A4V9 331 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 SDR42E2A6NKP2 422 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 PAPSS1O43252 624 aaPredicted RBP11.09□□□□□ -0.63
CLIP4-204ENST00000404424 INSRRP14616 1297 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 CPA2P48052 419 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 KCTD2Q14681 263 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 CES4AQ5XG92 561 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 TMEM154Q6P9G4 183 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 KCNT2Q6UVM3 1135 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 ADGRF2Q8IZF7 708 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 PPP1R14CQ8TAE6 165 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 PIWIL2Q8TC59 973 aaKnown RBP11.09□□□□□ -0.63
CLIP4-204ENST00000404424 COPS5Q92905 334 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 ZBTB10Q96DT7 871 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 KIF12Q96FN5 646 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 RILPQ96NA2 401 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 C11orf84Q9BUA3 381 aaPredicted RBP11.09□□□□□ -0.63
CLIP4-204ENST00000404424 GPAMQ9HCL2 828 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 AKT3Q9Y243 479 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 DERAQ9Y315 318 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 CSADQ9Y600 493 aa11.09□□□□□ -0.63
CLIP4-204ENST00000404424 ZSWIM8A7E2V4 1837 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 CCDC195A0A1B0GUA6 201 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 GLRA3O75311 464 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 CSDE1O75534 798 aaKnown RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 MAP3K6O95382 1288 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 CYP2C8P10632 490 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 KITP10721 976 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 AOC1P19801 751 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 ACTR3P61158 418 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 AP2B1P63010 937 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 IGBP1P78318 339 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 GBE1Q04446 702 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 SLC10A2Q12908 348 aaPredicted RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 RCN2Q14257 317 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 GSTA3Q16772 222 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 FASTKD1Q53R41 847 aaKnown RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 ARHGAP17Q68EM7 881 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 SLC26A9Q7LBE3 791 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 UNC93AQ86WB7 457 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 ULK2Q8IYT8 1036 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 MPP5Q8N3R9 675 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 DTX3LQ8TDB6 740 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 ZNF184Q99676 751 aaPredicted RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 DHX35Q9H5Z1 703 aaKnown RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 GPRC5DQ9NZD1 345 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 SCOCQ9UIL1 159 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 AP4E1Q9UPM8 1137 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 EVPLQ92817 2033 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 BRCA1P38398 1863 aaKnown RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 A0A0G2JLL6 359 aaPredicted RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 KLHL2O95198 593 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 AMPD1P23109 780 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 GRM5P41594 1212 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 CCNHP51946 323 aaPredicted RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 ALDH18A1P54886 795 aaKnown RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 KDSRQ06136 332 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 INSCQ1MX18 579 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 LRRC8BQ6P9F7 803 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 PRRT2Q7Z6L0 340 aaPredicted RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 ACOT1Q86TX2 421 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 MYLK4Q86YV6 388 aaPredicted RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 TFB1MQ8WVM0 346 aaKnown RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 HTR3CQ8WXA8 447 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 MMP19Q99542 508 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 SYT15Q9BQS2 421 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 NAT9Q9BTE0 207 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 C20orf27Q9GZN8 174 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 PLEKHA5Q9HAU0 1116 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 EIF2B3Q9NR50 452 aaKnown RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 MARCOQ9UEW3 520 aaPredicted RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 DCDC2Q9UHG0 476 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 SOX13Q9UN79 622 aa11.08□□□□□ -0.64
CLIP4-204ENST00000404424 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.08□□□□□ -0.64
CLIP4-204ENST00000404424 COL1A2P08123 1366 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 A0A0A0MRY4 1105 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 MAGEA13PA6NCF6 341 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 PRR5-ARHGAP8B1AHC4 643 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms