RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 RDXP35241 583 aaKnown RBP34.64■■■■□ 3.14
CSNK1E-204ENST00000403904 HDAC4P56524 1084 aa34.64■■■■□ 3.14
CSNK1E-204ENST00000403904 ARHGAP29Q52LW3 1261 aa34.64■■■■□ 3.14
CSNK1E-204ENST00000403904 SH3RF2Q8TEC5 729 aa34.64■■■■□ 3.14
CSNK1E-204ENST00000403904 WBP2Q969T9 261 aa34.64■■■■□ 3.14
CSNK1E-204ENST00000403904 RPGRIP1Q96KN7 1286 aa34.64■■■■□ 3.14
CSNK1E-204ENST00000403904 LEFTY2O00292 366 aa34.63■■■■□ 3.13
CSNK1E-204ENST00000403904 F9P00740 461 aa34.63■■■■□ 3.13
CSNK1E-204ENST00000403904 KPNA1P52294 538 aaPredicted RBP34.63■■■■□ 3.13
CSNK1E-204ENST00000403904 NNTQ13423 1086 aa34.63■■■■□ 3.13
CSNK1E-204ENST00000403904 HS1BP3Q53T59 392 aa34.63■■■■□ 3.13
CSNK1E-204ENST00000403904 ZC3H12AQ5D1E8 599 aaKnown RBP34.63■■■■□ 3.13
CSNK1E-204ENST00000403904 ARFGAP1Q8N6T3 406 aa34.63■■■■□ 3.13
CSNK1E-204ENST00000403904 TPCN2Q8NHX9 752 aa34.63■■■■□ 3.13
CSNK1E-204ENST00000403904 RNF34Q969K3 372 aa34.63■■■■□ 3.13
CSNK1E-204ENST00000403904 C2CD4DB7Z1M9 353 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 BUB1BO60566 1050 aaPredicted RBP34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 STC2O76061 302 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 PROSCO94903 275 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 FAM131BQ86XD5 332 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 CPNE8Q86YQ8 564 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 REXO1L1PQ8IX06 675 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 NIPA2Q8N8Q9 360 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 TDRD5Q8NAT2 981 aaKnown RBP34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 RIN3Q8TB24 985 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 RSPRY1Q96DX4 576 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 SLC39A13Q96H72 371 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 FCRL2Q96LA5 508 aaPredicted RBP34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 CFAP97Q9P2B7 532 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 EPS15L1Q9UBC2 864 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 RNF8O76064 485 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 MOCS3O95396 460 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 IGLV3-27P01718 113 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 FCARP24071 287 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 SND1Q7KZF4 910 aaKnown RBP eCLIP34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 CELF5Q8N6W0 485 aaKnown RBP34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 TRPV4Q9HBA0 871 aa34.62■■■■□ 3.13
CSNK1E-204ENST00000403904 USP27XA6NNY8 438 aa34.61■■■■□ 3.13
CSNK1E-204ENST00000403904 LRCH4O75427 683 aa34.61■■■■□ 3.13
CSNK1E-204ENST00000403904 CXCR3P49682 368 aa34.61■■■■□ 3.13
CSNK1E-204ENST00000403904 ACAP1Q15027 740 aa34.61■■■■□ 3.13
CSNK1E-204ENST00000403904 TANGO2Q6ICL3 276 aa34.61■■■■□ 3.13
CSNK1E-204ENST00000403904 PLD4Q96BZ4 506 aa34.61■■■■□ 3.13
CSNK1E-204ENST00000403904 GOLPH3Q9H4A6 298 aa34.61■■■■□ 3.13
CSNK1E-204ENST00000403904 ZFP14Q9HCL3 533 aa34.61■■■■□ 3.13
CSNK1E-204ENST00000403904 LCMT1Q9UIC8 334 aa34.61■■■■□ 3.13
CSNK1E-204ENST00000403904 NR2E1Q9Y466 385 aa34.61■■■■□ 3.13
CSNK1E-204ENST00000403904 SCAMP3O14828 347 aaKnown RBP34.6■■■■□ 3.13
CSNK1E-204ENST00000403904 CCR1P32246 355 aa34.6■■■■□ 3.13
CSNK1E-204ENST00000403904 RING1Q06587 406 aa34.6■■■■□ 3.13
CSNK1E-204ENST00000403904 AAK1Q2M2I8 961 aa34.6■■■■□ 3.13
CSNK1E-204ENST00000403904 SCYL2Q6P3W7 929 aa34.6■■■■□ 3.13
CSNK1E-204ENST00000403904 PARM1Q6UWI2 310 aa34.6■■■■□ 3.13
CSNK1E-204ENST00000403904 FGF14Q92915 247 aa34.6■■■■□ 3.13
CSNK1E-204ENST00000403904 LRRC3BQ96PB8 259 aa34.6■■■■□ 3.13
CSNK1E-204ENST00000403904 WDCPQ9H6R7 721 aa34.6■■■■□ 3.13
CSNK1E-204ENST00000403904 KIF9Q9HAQ2 790 aa34.6■■■■□ 3.13
CSNK1E-204ENST00000403904 SLTMQ9NWH9 1034 aaKnown RBP eCLIP34.6■■■■□ 3.133e-10■■■■■ 28.7
CSNK1E-204ENST00000403904 ZNF77Q15935 545 aa34.59■■■■□ 3.13
CSNK1E-204ENST00000403904 IFI16Q16666 785 aaKnown RBP34.59■■■■□ 3.13
CSNK1E-204ENST00000403904 DDX42Q86XP3 938 aaKnown RBP eCLIP34.59■■■■□ 3.13
CSNK1E-204ENST00000403904 CCAR2Q8N163 923 aaKnown RBP34.59■■■■□ 3.13
CSNK1E-204ENST00000403904 RNF10Q8N5U6 811 aaKnown RBP34.59■■■■□ 3.13
CSNK1E-204ENST00000403904 SH3BP1Q9Y3L3 701 aa34.59■■■■□ 3.13
CSNK1E-204ENST00000403904 KLKB1P03952 638 aa34.58■■■■□ 3.13
CSNK1E-204ENST00000403904 PPP2R5DQ14738 602 aa34.58■■■■□ 3.13
CSNK1E-204ENST00000403904 CC2D1AQ6P1N0 951 aaPredicted RBP34.58■■■■□ 3.13
CSNK1E-204ENST00000403904 DAAM2Q86T65 1068 aa34.58■■■■□ 3.13
CSNK1E-204ENST00000403904 CALR3Q96L12 384 aaKnown RBP34.58■■■■□ 3.13
CSNK1E-204ENST00000403904 PCSK1NQ9UHG2 260 aa34.58■■■■□ 3.13
CSNK1E-204ENST00000403904 HYOU1Q9Y4L1 999 aa34.58■■■■□ 3.13
CSNK1E-204ENST00000403904 HEPACAM2A8MVW5 462 aa34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 GREM1O60565 184 aa34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 MOCS2O96007 188 aaPredicted RBP34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 TCF4P15884 667 aa34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 MIPP30301 263 aa34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 CORO1AP31146 461 aaKnown RBP34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 HARS2P49590 506 aaKnown RBP34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 USP4Q13107 963 aa34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 NUGGCQ68CJ6 796 aa34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 KXD1Q9BQD3 176 aa34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 TKTL2Q9H0I9 626 aa34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 ANLNQ9NQW6 1124 aa34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 CAPN6Q9Y6Q1 641 aa34.57■■■■□ 3.13
CSNK1E-204ENST00000403904 GRID2IPA4D2P6 1211 aa34.57■■■■□ 3.12
CSNK1E-204ENST00000403904 APOEP02649 317 aa34.57■■■■□ 3.12
CSNK1E-204ENST00000403904 SLC2A3P11169 496 aa34.57■■■■□ 3.12
CSNK1E-204ENST00000403904 TCF3P15923 654 aa34.57■■■■□ 3.12
CSNK1E-204ENST00000403904 MAN1A1P33908 653 aa34.57■■■■□ 3.12
CSNK1E-204ENST00000403904 DENND1CQ8IV53 801 aa34.57■■■■□ 3.12
CSNK1E-204ENST00000403904 UNC45BQ8IWX7 931 aa34.57■■■■□ 3.12
CSNK1E-204ENST00000403904 KIAA1524Q8TCG1 905 aa34.57■■■■□ 3.12
CSNK1E-204ENST00000403904 TMPRSS4Q9NRS4 437 aa34.57■■■■□ 3.12
CSNK1E-204ENST00000403904 ALG6Q9Y672 507 aa34.57■■■■□ 3.12
CSNK1E-204ENST00000403904 KCNU1A8MYU2 1149 aa34.56■■■■□ 3.12
CSNK1E-204ENST00000403904 PCK1P35558 622 aa34.56■■■■□ 3.12
CSNK1E-204ENST00000403904 SSR1P43307 286 aaKnown RBP34.56■■■■□ 3.12
CSNK1E-204ENST00000403904 BRMS1LQ5PSV4 323 aa34.56■■■■□ 3.12
CSNK1E-204ENST00000403904 C11orf63Q6NUN7 778 aa34.56■■■■□ 3.12
CSNK1E-204ENST00000403904 C17orf53Q8N3J3 647 aaPredicted RBP34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms