RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CDH17Q12864 832 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 FSCN1Q16658 493 aaKnown RBP18.68■□□□□ 0.58
COL18A1-204ENST00000400337 HES6Q96HZ4 224 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 ADGRE3Q9BY15 652 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 BATF3Q9NR55 127 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 GTF2BQ00403 316 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 COL9A3Q14050 684 aaPredicted RBP18.68■□□□□ 0.58
COL18A1-204ENST00000400337 TNIP2Q8NFZ5 429 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 TMEM134Q9H6X4 195 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 ATP11BQ9Y2G3 1177 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 UBIAD1Q9Y5Z9 338 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 NFASCO94856 1347 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 A0A0U1RQJ8 604 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 SPTLC1O15269 473 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 RAMP2O60895 175 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 KPNA1P52294 538 aaPredicted RBP18.68■□□□□ 0.58
COL18A1-204ENST00000400337 ZNF844Q08AG5 666 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 RASA2Q15283 850 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 SYTL2Q9HCH5 934 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 DMAP1Q9NPF5 467 aaPredicted RBP18.68■□□□□ 0.58
COL18A1-204ENST00000400337 EPHB6O15197 1021 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 MGAT1P26572 445 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 CELF3Q5SZQ8 465 aaKnown RBP18.68■□□□□ 0.58
COL18A1-204ENST00000400337 TMC7Q7Z402 723 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 B4GALNT2Q8NHY0 566 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 HPS4Q9NQG7 708 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 PCDHGC5Q9Y5F6 944 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 MAGEB16A2A368 324 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 PRKCIP41743 596 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 ACBD5Q5T8D3 534 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-204ENST00000400337 HERC6Q8IVU3 1022 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 UTP6Q9NYH9 597 aaKnown RBP18.67■□□□□ 0.58
COL18A1-204ENST00000400337 KCNA4P22459 653 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 IQSEC1Q6DN90 963 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 AADACL2Q6P093 401 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 KCNT2Q6UVM3 1135 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 C10orf88Q9H8K7 445 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 SERPINF2P08697 491 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 OCM2P0CE71 109 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 OCMP0CE72 109 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-204ENST00000400337 WEE1P30291 646 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 WASHC5Q12768 1159 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 TDRD5Q8NAT2 981 aaKnown RBP18.67■□□□□ 0.58
COL18A1-204ENST00000400337 TMEM161BQ8NDZ6 487 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 GDF3Q9NR23 364 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 CDV3Q9UKY7 258 aaKnown RBP18.67■□□□□ 0.58
COL18A1-204ENST00000400337 RNF103O00237 685 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 IRF6O14896 467 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 ZBTB22O15209 634 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 EPB42P16452 691 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 IFI35P80217 286 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-204ENST00000400337 CYLC2Q14093 348 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-204ENST00000400337 N4BP2L1Q5TBK1 243 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-204ENST00000400337 LRRC8BQ6P9F7 803 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 LPCAT1Q8NF37 534 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 IL31RAQ8NI17 732 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 CIPCQ9C0C6 399 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 SOX13Q9UN79 622 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 ERI2A8K979 691 aaKnown RBP18.67■□□□□ 0.58
COL18A1-204ENST00000400337 PQBP1O60828 265 aaKnown RBP18.67■□□□□ 0.58
COL18A1-204ENST00000400337 UBOX5O94941 541 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 NR2C2P49116 596 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 CES3Q6UWW8 571 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 SCUBE1Q8IWY4 988 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 GAD1Q99259 594 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 GIMAP4Q9NUV9 329 aa18.67■□□□□ 0.58
COL18A1-204ENST00000400337 XPO1O14980 1071 aaKnown RBP18.66■□□□□ 0.58
COL18A1-204ENST00000400337 OR1E1P30953 314 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 ZNF284Q2VY69 593 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 TCP10LQ8TDR4 215 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 AENQ8WTP8 325 aaKnown RBP18.66■□□□□ 0.58
COL18A1-204ENST00000400337 EMILIN2Q9BXX0 1053 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 CALB2P22676 271 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 PSMA4P25789 261 aaKnown RBP18.66■□□□□ 0.58
COL18A1-204ENST00000400337 SERPINB10P48595 397 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 RAP1GDS1P52306 607 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 UCMAQ8WVF2 138 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 SMPD4Q9NXE4 827 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 USP17L7P0C7H9 530 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 YBX3P16989 372 aaKnown RBP eCLIP18.66■□□□□ 0.584e-7■■■□□ 16.6
COL18A1-204ENST00000400337 GP5P40197 560 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 PPP1R13LQ8WUF5 828 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 CCT7Q99832 543 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 CD248Q9HCU0 757 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 TRPV2Q9Y5S1 764 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 MT-CO1P00395 513 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 MYL4P12829 197 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 BDNFP23560 247 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 PBLDP30039 288 aaPredicted RBP18.66■□□□□ 0.58
COL18A1-204ENST00000400337 CD151P48509 253 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 RENBPP51606 427 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 HPCAP84074 193 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 WLSQ5T9L3 541 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 OTOAQ7RTW8 1153 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 KCNMB4Q86W47 210 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 KATNAL2Q8IYT4 538 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 SOCS4Q8WXH5 440 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 PLEKHA8Q96JA3 519 aa18.66■□□□□ 0.58
COL18A1-204ENST00000400337 APOC4-APOC2K7ER74 178 aa18.65■□□□□ 0.58
COL18A1-204ENST00000400337 APOC2P02655 101 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms