RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 MAGEB2O15479 319 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 KRT34O76011 436 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 PRR29P0C7W0 189 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 MYBP10242 640 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 HOXC8P31273 242 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 PSMD4P55036 377 aaKnown RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 ABATP80404 500 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 MAPK11Q15759 364 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 SMU1Q2TAY7 513 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 USPL1Q5W0Q7 1092 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 APOPT1Q96IL0 206 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 TRIM2Q9C040 744 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 TRIT1Q9H3H1 467 aaKnown RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 DSN1Q9H410 356 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 MAGEE1Q9HCI5 957 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 EPB41L4AQ9HCS5 686 aaPredicted RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 ARHGEF5Q12774 1597 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 FCHO1O14526 889 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 TNFRSF21O75509 655 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 ABHD2P08910 425 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 TPI1P60174 286 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 NKX1-1Q15270 411 aaPredicted RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 GALNTL6Q49A17 601 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 BOLA3Q53S33 107 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 GPD1LQ8N335 351 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 SLC25A41Q8N5S1 370 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 CKAP2Q8WWK9 683 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 STARD8Q92502 1023 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 RFT1Q96AA3 541 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 VPS35Q96QK1 796 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 ZNF222Q9UK12 451 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 ZNF221Q9UK13 617 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 MLH3Q9UHC1 1453 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 SERPINA3P01011 423 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 SULT1E1P49888 294 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 CASP5P51878 434 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 CAMK2GQ13555 558 aaPredicted RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 GRM4Q14833 912 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 ZC2HC1CQ53FD0 456 aaPredicted RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 NEK5Q6P3R8 708 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 ZNF671Q8TAW3 534 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 PROX1Q92786 737 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 AHCYL2Q96HN2 611 aaKnown RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 FAM111AQ96PZ2 611 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 UNKQ9C0B0 810 aaKnown RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 MUC13Q9H3R2 512 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 CCDC189A1A4V9 331 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 H7C1W4 665 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 ZC3H11AO75152 810 aaKnown RBP eCLIP8.59□□□□□ -1.03
CHD8-201ENST00000399982 PSMB9P28065 219 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 EXOSC10Q01780 885 aaKnown RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 MSLNQ13421 630 aaPredicted RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 ZCCHC8Q6NZY4 707 aaKnown RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 ZYG11AQ6WRX3 759 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 MARCH10Q8NA82 808 aaPredicted RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 MYDGFQ969H8 173 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 TMEM237Q96Q45 408 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 BAIAP2Q9UQB8 552 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 MROH7-TTC4A0A0A0MT08 1334 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 ACSL4O60488 711 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 PRKAR1AP10644 381 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 MUTP22033 750 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 GCLMP48507 274 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 CASP4P49662 377 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 SUPT20HL1Q3ZLR7 823 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 ADHFE1Q8IWW8 467 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 ADCY4Q8NFM4 1077 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 OSBP2Q969R2 916 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 ZNF333Q96JL9 665 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 CDC42EP4Q9H3Q1 356 aaKnown RBP8.58□□□□□ -1.04
CHD8-201ENST00000399982 CCDC177Q9NQR7 707 aaPredicted RBP8.58□□□□□ -1.04
CHD8-201ENST00000399982 H3BMM5 538 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 CCNB2O95067 398 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 CPSF4O95639 269 aaKnown RBP8.58□□□□□ -1.04
CHD8-201ENST00000399982 FDX1P10109 184 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 ATF6P18850 670 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 RPL22P35268 128 aaKnown RBP8.58□□□□□ -1.04
CHD8-201ENST00000399982 SLC5A9Q2M3M2 681 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 DENND5AQ6IQ26 1287 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 NSMCE2Q96MF7 247 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 PIF1Q9H611 641 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 LY9Q9HBG7 655 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 UBP1Q9NZI7 540 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 TIMM8BQ9Y5J9 83 aaPredicted RBP8.58□□□□□ -1.04
CHD8-201ENST00000399982 LOC100653049A0A140TA62 436 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 SLC26A3P40879 764 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 BTDP43251 543 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 ALDH1A3P47895 512 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 EFNA5P52803 228 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 STXBP1P61764 594 aaKnown RBP8.58□□□□□ -1.04
CHD8-201ENST00000399982 CYP24A1Q07973 514 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 BNIP2Q12982 314 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 SMCO1Q147U7 214 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 ARCQ7LC44 396 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 ZDHHC13Q8IUH4 622 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 RBM12BQ8IXT5 1001 aaKnown RBP8.58□□□□□ -1.04
CHD8-201ENST00000399982 PHACTR4Q8IZ21 702 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 HDAC7Q8WUI4 952 aa8.58□□□□□ -1.04
CHD8-201ENST00000399982 CAMKK2Q96RR4 588 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms