RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 CRAMP1Q96RY5 1269 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 ACSS2Q9NR19 701 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 RBAKQ9NYW8 714 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-201ENST00000399429 STK39Q9UEW8 545 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 H3BNX3 289 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 AGRPO00253 132 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 APOL1O14791 398 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 IDH3BO43837 385 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 SNX2O60749 519 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 TBXAS1P24557 533 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-201ENST00000399429 GRIA3P42263 894 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 DEFA1P59665 94 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 DEFA3P59666 94 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 RPL7AP62424 266 aaKnown RBP9.57□□□□□ -0.88
COL28A1-201ENST00000399429 LAMC2Q13753 1193 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 ANKS1BQ7Z6G8 1248 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 FAM71AQ8IYT1 594 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 C7orf31Q8N865 590 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 PCYOX1LQ8NBM8 494 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 MAGEE2Q8TD90 523 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-201ENST00000399429 CHURC1Q8WUH1 139 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 GAB3Q8WWW8 586 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 SLC10A4Q96EP9 437 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 LENG8Q96PV6 779 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-201ENST00000399429 SEPHS2Q99611 448 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 RIOX1Q9H6W3 641 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 WDR55Q9H6Y2 383 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-201ENST00000399429 USP29Q9HBJ7 922 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 ZFYVE28Q9HCC9 887 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 BFARQ9NZS9 450 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 SQORQ9Y6N5 450 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 MYO5BQ9ULV0 1848 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 A0A1W2PPW3 197 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 K7EPI3 171 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 PSMD11O00231 422 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 ATP5BP06576 529 aaKnown RBP9.57□□□□□ -0.88
COL28A1-201ENST00000399429 TAL1P17542 331 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-201ENST00000399429 FASP25445 335 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 CD97P48960 835 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 INPP1P49441 399 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 DPYSL3Q14195 570 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 USP10Q14694 798 aaKnown RBP9.57□□□□□ -0.88
COL28A1-201ENST00000399429 PLCL1Q15111 1095 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 NDUFA5Q16718 116 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 ZIK1Q3SY52 487 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-201ENST00000399429 DHFR2Q86XF0 187 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 TNS4Q8IZW8 715 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 C7orf26Q96N11 449 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 PIF1Q9H611 641 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 VPS45Q9NRW7 570 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 HESX1Q9UBX0 185 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 ITGA11Q9UKX5 1188 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 SLC8A2Q9UPR5 921 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 ITSN1Q15811 1721 aa9.57□□□□□ -0.88
COL28A1-201ENST00000399429 RGSL1A5PLK6 1076 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 F5H6K3 240 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 EML1O00423 815 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 BIRC5O15392 142 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 TBC1D4O60343 1298 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 GSNP06396 782 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 BPGMP07738 259 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 PDGFRAP16234 1089 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 RXRGP48443 463 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 KLF10Q13118 480 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 POLD3Q15054 466 aaPredicted RBP9.56□□□□□ -0.88
COL28A1-201ENST00000399429 FUT11Q495W5 492 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 C16orf86Q6ZW13 317 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 ZNF677Q86XU0 584 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 DDIASQ8IXT1 998 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 POC5Q8NA72 575 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 ZNF555Q8NEP9 628 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 ADAM32Q8TC27 787 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 SUN5Q8TC36 379 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 NCLNQ969V3 563 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 SLITRK1Q96PX8 696 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 REXO4Q9GZR2 422 aaKnown RBP9.56□□□□□ -0.88
COL28A1-201ENST00000399429 COQ10BQ9H8M1 238 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 RSAD1Q9HA92 442 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 TNS3Q68CZ2 1445 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 NOTOA8MTQ0 251 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 PFDN6O15212 129 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 TIPRLO75663 272 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 TSPAN9O75954 239 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 OXSR1O95747 527 aaPredicted RBP9.56□□□□□ -0.88
COL28A1-201ENST00000399429 TKTP29401 623 aaKnown RBP9.56□□□□□ -0.88
COL28A1-201ENST00000399429 SPRP35270 261 aaPredicted RBP9.56□□□□□ -0.88
COL28A1-201ENST00000399429 ABCG1P45844 678 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 DGCR6Q14129 220 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 PID1Q7Z2X4 250 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 LRP10Q7Z4F1 713 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 ZDHHC14Q8IZN3 488 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 PLEKHO2Q8TD55 490 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 LRRN4Q8WUT4 740 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 CITED4Q96RK1 184 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 HEPHQ9BQS7 1158 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 CHID1Q9BWS9 393 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 CEP44Q9C0F1 390 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 CD209Q9NNX6 404 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 SUN2Q9UH99 717 aa9.56□□□□□ -0.88
COL28A1-201ENST00000399429 EFR3BQ9Y2G0 817 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms