RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 NAGPAQ9UK23 515 aa12.37□□□□□ -0.43
SMIM11A-201ENST00000399292 TSPAN16Q9UKR8 245 aa12.37□□□□□ -0.43
SMIM11A-201ENST00000399292 SLC8A2Q9UPR5 921 aa12.37□□□□□ -0.43
SMIM11A-201ENST00000399292 PCDHB4Q9Y5E5 795 aa12.37□□□□□ -0.43
SMIM11A-201ENST00000399292 K7ESF4 209 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 XPO1O14980 1071 aaKnown RBP12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 PAEPP09466 180 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 HOXA6P31267 233 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 CNR2P34972 360 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 OPRD1P41143 372 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 FNTBP49356 437 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 TKTL1P51854 596 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 BCAT1P54687 386 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 GCNT1Q02742 428 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 GAD2Q05329 585 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 UBAP2LQ14157 1087 aaKnown RBP12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 GOLGA7BQ2TAP0 167 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 RAB41Q5JT25 222 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 C10orf120Q5SQS8 335 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 BTBD8Q5XKL5 378 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 PKN3Q6P5Z2 889 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 CLEC17AQ6ZS10 378 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 HTR3DQ70Z44 454 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 RRAGAQ7L523 313 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 SCD5Q86SK9 330 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 LONP2Q86WA8 852 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 TTC30AQ86WT1 665 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 ARHGAP18Q8N392 663 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 UBR7Q8N806 425 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 SUMF1Q8NBK3 374 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 UBA3Q8TBC4 463 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 RHBDD1Q8TEB9 315 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 RUBCNQ92622 972 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 PNKPQ96T60 521 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 HINFPQ9BQA5 517 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 EPC1Q9H2F5 836 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 LRRC4Q9HBW1 653 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 LSM7Q9UK45 103 aaKnown RBP12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 NUDT5Q9UKK9 219 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 OBSL1O75147 1896 aa12.36□□□□□ -0.43
SMIM11A-201ENST00000399292 K7EQS6 105 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 O00370 1275 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 ZBED1O96006 694 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 ADH5P11766 374 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 EIF2DP41214 584 aaKnown RBP12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 SLC6A11P48066 632 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 PDE4CQ08493 712 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 BST2Q10589 180 aaKnown RBP12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 CNGA2Q16280 664 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 TPD52L1Q16890 204 aaPredicted RBP12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 GAB4Q2WGN9 574 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 ANO4Q32M45 955 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 PREPLQ4J6C6 727 aaPredicted RBP12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 OXLD1Q5BKU9 147 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 LY6G5CQ5SRR4 150 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 HEATR6Q6AI08 1181 aaKnown RBP12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 PM20D1Q6GTS8 502 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 LCLAT1Q6UWP7 414 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 TMEM25Q86YD3 366 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 MIB1Q86YT6 1006 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 BBS7Q8IWZ6 715 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 PGBD3Q8N328 593 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 RPLP0P6Q8NHW5 317 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 EZH1Q92800 747 aaPredicted RBP12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 KAT5Q92993 513 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 SECISBP2LQ93073 1101 aaKnown RBP12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 WBP2Q969T9 261 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 CNOT6LQ96LI5 555 aaKnown RBP12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 INTS2Q9H0H0 1204 aaKnown RBP12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 NUP62CLQ9H1M0 184 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 UBE2TQ9NPD8 197 aaPredicted RBP12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 SPHK2Q9NRA0 654 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 RAB23Q9ULC3 237 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 ZNF638Q14966 1978 aaKnown RBP12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 DMXL1Q9Y485 3027 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 FAM186AA6NE01 2351 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 ANAPC1Q9H1A4 1944 aa12.35□□□□□ -0.43
SMIM11A-201ENST00000399292 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 TULP2O00295 520 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 MDM4O15151 490 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 APODP05090 189 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 SETSIPP0DME0 302 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 MSX1P28360 303 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 YWHAGP61981 247 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 COG7P83436 770 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 DMWDQ09019 674 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 TLR1Q15399 786 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 STILQ15468 1287 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 C2orf27AQ580R0 203 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 RSRC2Q7L4I2 434 aaKnown RBP12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 SYT13Q7L8C5 426 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 WDR5BQ86VZ2 330 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 ARHGEF19Q8IW93 802 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 CAMKK1Q8N5S9 505 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 NAT16Q8N8M0 369 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 RBBP8NLQ8NC74 664 aaPredicted RBP12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 KCTD13Q8WZ19 329 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 TFAP2BQ92481 460 aa12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 IPO9Q96P70 1041 aaKnown RBP12.34□□□□□ -0.43
SMIM11A-201ENST00000399292 MED15Q96RN5 788 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms