RNA–Protein interactions for RNA: ENST00000398849.6

AC005562.1-202, humanhuman

TSL 2

Gene AC005562.1, Length 1,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005562.1-202ENST00000398849 RPL13P26373 211 aaKnown RBP9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 CDR1P51861 262 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 NDUFA8P51970 172 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 SLC5A3P53794 718 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 ATXN1P54253 815 aaKnown RBP9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 MRPS21P82921 87 aaKnown RBP9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 BIRC3Q13489 604 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 RSPO4Q2I0M5 234 aaPredicted RBP9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 FOXR2Q6PJQ5 311 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 CACNA2D4Q7Z3S7 1137 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 C11orf74Q86VG3 221 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 TTC39CQ8N584 583 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 USP33Q8TEY7 942 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 NANOS1Q8WY41 292 aaKnown RBP9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 CCDC47Q96A33 483 aaKnown RBP9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 HNRNPABQ99729 332 aaKnown RBP9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 LINC00597Q9H2U6 94 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 FBXO44Q9H4M3 255 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 TRPC7Q9HCX4 862 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 SEMA4GQ9NTN9 838 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 FRMD4BQ9Y2L6 1034 aa9.1□□□□□ -0.95
AC005562.1-202ENST00000398849 PCNX2A6NKB5 2137 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 HHLA1C9JL84 531 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 COCHO43405 550 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 GREM1O60565 184 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 PHACTR2O75167 634 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 RPP40O75818 363 aaKnown RBP9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 ZNF202O95125 648 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 ZNF806P0C7X5 589 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 CD33P20138 364 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 NR2F2P24468 414 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 VAMP7P51809 220 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 CDH8P55286 799 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 DHCR24Q15392 516 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 HECTD3Q5T447 861 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 RHBDF2Q6PJF5 856 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 PRR23CQ6ZRP0 262 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 OLIG1Q8TAK6 271 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 TTC8Q8TAM2 541 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 FOXD4L4Q8WXT5 416 aaPredicted RBP9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 CNOT6LQ96LI5 555 aaKnown RBP9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 DMRTB1Q96MA1 342 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 KCNK16Q96T55 309 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 SMOQ99835 787 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 GTPBP4Q9BZE4 634 aaKnown RBP9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 UBXN6Q9BZV1 441 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 TMEM8AQ9HCN3 771 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 MARK1Q9P0L2 795 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 HCN2Q9UL51 889 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 MMP17Q9ULZ9 603 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 SLC8A2Q9UPR5 921 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 SCML2Q9UQR0 700 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 FNDC3AQ9Y2H6 1198 aaKnown RBP9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 COQ4Q9Y3A0 265 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 PCDHA5Q9Y5H7 936 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 CPQQ9Y646 472 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 CKAP5Q14008 2032 aa9.09□□□□□ -0.95
AC005562.1-202ENST00000398849 MED19A0JLT2 244 aaPredicted RBP9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 A6NHS1 94 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 CLDN5O00501 218 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 TM4SF5O14894 197 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 PMM2O15305 246 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 CILPO75339 1184 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 APBB3O95704 486 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 HLA-DRAP01903 254 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 PSMC2P35998 433 aaKnown RBP9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 TNFRSF4P43489 277 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 KIR2DL1P43626 348 aaPredicted RBP9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 NDST1P52848 882 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 PPP3CAQ08209 521 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 SPEM2Q0P670 501 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 DMC1Q14565 340 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 FOXD4L6Q3SYB3 417 aaPredicted RBP9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 PLK5Q496M5 336 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 NAIF1Q69YI7 327 aaPredicted RBP9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 KRT39Q6A163 491 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 FOXD4L3Q6VB84 417 aaPredicted RBP9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 CLEC20AQ6ZU45 233 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 HTR3DQ70Z44 454 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 FILIP1Q7Z7B0 1213 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 ENGASEQ8NFI3 743 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 RPLP0P6Q8NHW5 317 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 WHAMMQ8TF30 809 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 DDX1Q92499 740 aaKnown RBP9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 FBXO32Q969P5 355 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 CCDC34Q96HJ3 373 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 TIGD1Q96MW7 591 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 GSDMAQ96QA5 445 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 NIF3L1Q9GZT8 377 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 APOBEC3GQ9HC16 384 aaKnown RBP9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 STARD13Q9Y3M8 1113 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 ACACBO00763 2458 aa9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 ASCC3Q8N3C0 2202 aaKnown RBP9.08□□□□□ -0.96
AC005562.1-202ENST00000398849 BEST1O76090 585 aa9.07□□□□□ -0.96
AC005562.1-202ENST00000398849 MBL2P11226 248 aaPredicted RBP9.07□□□□□ -0.96
AC005562.1-202ENST00000398849 TRIM21P19474 475 aaKnown RBP9.07□□□□□ -0.96
AC005562.1-202ENST00000398849 KIF11P52732 1056 aa9.07□□□□□ -0.96
AC005562.1-202ENST00000398849 GAD2Q05329 585 aa9.07□□□□□ -0.96
AC005562.1-202ENST00000398849 SRSF5Q13243 272 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms