RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PRR5-ARHGAP8B1AHC4 643 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 PGRMC1O00264 195 aaKnown RBP18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 CEP104O60308 925 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 CILPO75339 1184 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 HMGA1P17096 107 aaKnown RBP18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 SDHBP21912 280 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 TNFRSF8P28908 595 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 ARHGAP8P85298 464 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 DMWDQ09019 674 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 PON2Q15165 354 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 TAF12Q16514 161 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 LPAL2Q16609 132 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 MAP9Q49MG5 647 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 CCNI2Q6ZMN8 369 aaPredicted RBP18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 DPH6Q7L8W6 267 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 MCOLN2Q8IZK6 566 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 NUP85Q9BW27 656 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 ZNF518BQ9C0D4 1074 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 C2orf42Q9NWW7 574 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 RAB23Q9ULC3 237 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 USP18Q9UMW8 372 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 PCDHB5Q9Y5E4 795 aa18.27■□□□□ 0.52
TNFSF13-205ENST00000396545 ATMINO43313 823 aaPredicted RBP18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 LSM8O95777 96 aaKnown RBP18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 CD58P19256 250 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 TSPY1Q01534 308 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 ITPRIPL2Q3MIP1 535 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 DCAF12L1Q5VU92 463 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 C8orf74Q6P047 294 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 UNC93AQ86WB7 457 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 SYNPOQ8N3V7 929 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 ZNF564Q8TBZ8 553 aaPredicted RBP18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 ZNF606Q8WXB4 792 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 VCPIP1Q96JH7 1222 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 THG1LQ9NWX6 298 aaKnown RBP18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 CNOT8Q9UFF9 292 aaKnown RBP18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 DMGDHQ9UI17 866 aaKnown RBP18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 PCDHGC3Q9UN70 934 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 CEP83Q9Y592 693 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 DENND4CQ5VZ89 1909 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 EPG5Q9HCE0 2579 aa18.26■□□□□ 0.51
TNFSF13-205ENST00000396545 CHURC1-FNTBB4DL54 471 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 THAP12O43422 761 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 HRO43593 1189 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 F11P03951 625 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 PLA2G4AP47712 749 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 FNTBP49356 437 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 NOMO3P69849 1222 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 STILQ15468 1287 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 NFE2Q16621 373 aaPredicted RBP18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 SCARA5Q6ZMJ2 495 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 PRR23BQ6ZRT6 265 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 MON1BQ7L1V2 547 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 HDXQ7Z353 690 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 CD101Q93033 1021 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 FAM83CQ9BQN1 747 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 UBXN6Q9BZV1 441 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 SMYD3Q9H7B4 428 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 STIM2Q9P246 746 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 CCL26Q9Y258 94 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 SNX9Q9Y5X1 595 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 TPRP12270 2363 aaKnown RBP18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 FAM170AA1A519 330 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 CCDC188H7C350 402 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 RETP07949 1114 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 DDX6P26196 483 aaKnown RBP eCLIP18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 HOXA6P31267 233 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 AVPR1AP37288 418 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 GPR15P49685 360 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 ATXN1P54253 815 aaKnown RBP18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 NAA35Q5VZE5 725 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 LONP2Q86WA8 852 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 PHF13Q86YI8 300 aaPredicted RBP18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 MAB21L3Q8N8X9 362 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 USP13Q92995 863 aaPredicted RBP18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 CYFIP2Q96F07 1278 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 TMEM176AQ96HP8 235 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 PKMYT1Q99640 499 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 ACBD6Q9BR61 282 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 NT5C1AQ9BXI3 368 aa18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 CDV3Q9UKY7 258 aaKnown RBP18.25■□□□□ 0.51
TNFSF13-205ENST00000396545 OBSL1O75147 1896 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 SOBPA7XYQ1 873 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 LRP3O75074 770 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 VDRP11473 427 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 COMTP21964 271 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 CTNNA2P26232 953 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 CNR2P34972 360 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 RAD23BP54727 409 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 SPEM2Q0P670 501 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 SIM2Q14190 667 aaPredicted RBP18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 MESDQ14696 234 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 INTS6LQ5JSJ4 861 aaKnown RBP18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 LIMS2Q7Z4I7 341 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 TMEM86AQ8N2M4 240 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 TOP6BLQ8N6T0 577 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 STKLD1Q8NE28 680 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 SPATA18Q8TC71 538 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 ALG3Q92685 438 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 CHFRQ96EP1 664 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms