RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 EFHD1Q9BUP0 239 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 OSGEPQ9NPF4 335 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 VPS45Q9NRW7 570 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 TOR4AQ9NXH8 423 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 AIPL1Q9NZN9 384 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 PCDHA2Q9Y5H9 948 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 PCDHAC2Q9Y5I4 1007 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 A0A1W2PPW3 197 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 ANKRD34BA5PLL1 514 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 USP17L10C9JJH3 530 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 SGK1O00141 431 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 CLDN3O15551 220 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 FARP2O94887 1054 aaPredicted RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 NADKO95544 446 aaPredicted RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 TTLL1O95922 423 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 TMEM191BP0C7N4 346 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 XRCC5P13010 732 aaKnown RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 ALOX12P18054 663 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 SKIV2L2P42285 1042 aaKnown RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 ITGA8P53708 1063 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 CD300CQ08708 224 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 FCHO2Q0JRZ9 810 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 MAPK7Q13164 816 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 SEMA3AQ14563 771 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 LAYNQ6UX15 382 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 OTOP1Q7RTM1 612 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 NATD1Q8N6N6 113 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 TOR1AIP2Q8NFQ8 470 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 CDC26Q8NHZ8 85 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 ZNF75CPQ92670 426 aaPredicted RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 SERPINB12Q96P63 405 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 MIR1-1HGQ9H1L0 117 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 SBF1O95248 1867 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 SAC3D1A6NKF1 404 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 MEN1O00255 615 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ZBTB39O15060 712 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 RARGP13631 454 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 TAL1P17542 331 aaPredicted RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 ITGALP20701 1170 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 NFIAQ12857 509 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 CRHR2Q13324 411 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ORC2Q13416 577 aaPredicted RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 GADL1Q6ZQY3 521 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 C16orf62Q7Z3J2 963 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 IFNL1Q8IU54 200 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ZFPM1Q8IX07 1006 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 NAT16Q8N8M0 369 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 RBM15BQ8NDT2 890 aaKnown RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 UBASH3BQ8TF42 649 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 SLC35B4Q969S0 331 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 MRPS26Q9BYN8 205 aaKnown RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 BCAS3Q9H6U6 928 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 PARVAQ9NVD7 372 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.67□□□□□ -1.02
NDE1-202ENST00000396355 AGTPBP1Q9UPW5 1226 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ZNF646O15015 1829 aaPredicted RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 USP17L15C9J2P7 530 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 USP17L13C9JLJ4 530 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 USP17L11C9JVI0 530 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 USP17L18D6R9N7 530 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 USP17L22D6RA61 530 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 USP17L17D6RBQ6 530 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 USP17L19D6RCP7 530 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 USP17L20D6RJB6 530 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 SNX2O60749 519 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ALADP13716 330 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 CHRNA3P32297 505 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 FDFT1P37268 417 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 PKNOX1P55347 436 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 SULT2A1Q06520 285 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 USP17L24Q0WX57 530 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 PPP1R3AQ16821 1122 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ASPRV1Q53RT3 343 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 IZUMO3Q5VZ72 239 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 USP17L6PQ6QN14 398 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 OTOAQ7RTW8 1153 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 PRMT6Q96LA8 375 aaPredicted RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 HTATIP2Q9BUP3 242 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ROPN1BQ9BZX4 212 aaPredicted RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 STN1Q9H668 368 aaKnown RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 ROPN1Q9HAT0 212 aaPredicted RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 SMYD2Q9NRG4 433 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 TBCCD1Q9NVR7 557 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 FKBP14Q9NWM8 211 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 GMIPQ9P107 970 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 FAM8A1Q9UBU6 413 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 DDX25Q9UHL0 483 aaKnown RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 GNEQ9Y223 722 aaKnown RBP8.67□□□□□ -1.02
NDE1-202ENST00000396355 SNX5Q9Y5X3 404 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 PRR23AA6NEV1 266 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 SERPINB7O75635 380 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 PAEPP09466 180 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 FOSL2P15408 326 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 ZNF12P17014 697 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 PCSK6P29122 969 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 FOXN2P32314 431 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 NUDT2P50583 147 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 GTF2A2P52657 109 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 COPAP53621 1224 aa8.67□□□□□ -1.02
NDE1-202ENST00000396355 GALCP54803 685 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms