RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TOGARAM2Q6ZUX3 1019 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 CPXM2Q8N436 756 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 FRMD1Q8N878 549 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 DEFB124Q8NES8 71 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 SEMA4DQ92854 862 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 SIPA1Q96FS4 1042 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 NT5C1BQ96P26 610 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 ACOX2Q99424 681 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 ULBP1Q9BZM6 244 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 ZDHHC5Q9C0B5 715 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 GDPD2Q9HCC8 539 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 ABCC13Q9NSE7 274 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 ELOVL2Q9NXB9 296 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 TSPAN16Q9UKR8 245 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 AGO1Q9UL18 857 aaKnown RBP17.13■□□□□ 0.33
DDR1-229ENST00000396342 RAD54BQ9Y620 910 aa17.13■□□□□ 0.33
DDR1-229ENST00000396342 ACACBO00763 2458 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 BICDL2A1A5D9 508 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 ANTXRLA6NF34 631 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 CDX4O14627 284 aaPredicted RBP17.12■□□□□ 0.33
DDR1-229ENST00000396342 GREM1O60565 184 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 CISD3P0C7P0 127 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 SLC11A2P49281 568 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 MFAP3P55082 362 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 SFSWAPQ12872 951 aaKnown RBP17.12■□□□□ 0.33
DDR1-229ENST00000396342 LRMPQ12912 555 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 COBLL1Q53SF7 1204 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 METTL3Q86U44 580 aaKnown RBP17.12■□□□□ 0.33
DDR1-229ENST00000396342 FMNL3Q8IVF7 1028 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 UNC45BQ8IWX7 931 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 WFIKKN2Q8TEU8 576 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 ERLEC1Q96DZ1 483 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 TMA16Q96EY4 203 aaKnown RBP17.12■□□□□ 0.33
DDR1-229ENST00000396342 MRGPRX1Q96LB2 322 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 TMEM74BQ9NUR3 256 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 ZDHHC9Q9Y397 364 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 PCDHB4Q9Y5E5 795 aa17.12■□□□□ 0.33
DDR1-229ENST00000396342 TMEM8BA6NDV4 472 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 LATS1O95835 1130 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 ATP5BP06576 529 aaKnown RBP17.11■□□□□ 0.33
DDR1-229ENST00000396342 EPHX1P07099 455 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 PAEPP09466 180 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 SIM1P81133 766 aaPredicted RBP17.11■□□□□ 0.33
DDR1-229ENST00000396342 PDE4CQ08493 712 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 ADIGQ0VDE8 80 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 SLC14A1Q13336 389 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 FNDC3BQ53EP0 1204 aaKnown RBP17.11■□□□□ 0.33
DDR1-229ENST00000396342 RAB41Q5JT25 222 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 PEAR1Q5VY43 1037 aaPredicted RBP17.11■□□□□ 0.33
DDR1-229ENST00000396342 PM20D1Q6GTS8 502 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 KIAA1211LQ6NV74 962 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 TATDN2Q93075 761 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 DHTKD1Q96HY7 919 aaPredicted RBP17.11■□□□□ 0.33
DDR1-229ENST00000396342 CEP63Q96MT8 703 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 ARID3AQ99856 593 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 TRIM62Q9BVG3 475 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 NUP58Q9BVL2 599 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 MIR1-1HGQ9H1L0 117 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 CNGB3Q9NQW8 809 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 THAP10Q9P2Z0 257 aaPredicted RBP17.11■□□□□ 0.33
DDR1-229ENST00000396342 FBXO10Q9UK96 956 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 ATG2BQ96BY7 2078 aa17.11■□□□□ 0.33
DDR1-229ENST00000396342 HELZP42694 1942 aaKnown RBP17.1■□□□□ 0.33
DDR1-229ENST00000396342 GREB1Q4ZG55 1949 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 ANAPC1Q9H1A4 1944 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 UPK3BL1B0FP48 263 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 UPK3BL2E5RIL1 263 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 GIPC1O14908 333 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 SART1O43290 800 aaKnown RBP17.1■□□□□ 0.33
DDR1-229ENST00000396342 FGFR1OPO95684 399 aaKnown RBP17.1■□□□□ 0.33
DDR1-229ENST00000396342 PROS1P07225 676 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 LCP1P13796 627 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 ST8SIA6P61647 398 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 FUT11Q495W5 492 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 FYB2Q5VWT5 728 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 BSPRYQ5W0U4 402 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 NUGGCQ68CJ6 796 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 ANKRD40Q6AI12 368 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 TMEM270Q6UE05 265 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 IL27RAQ6UWB1 636 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 TMPRSS6Q8IU80 811 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 PPM1KQ8N3J5 372 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 MINDY1Q8N5J2 469 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 CADM4Q8NFZ8 388 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 TOE1Q96GM8 510 aaKnown RBP17.1■□□□□ 0.33
DDR1-229ENST00000396342 ZNF419Q96HQ0 510 aaPredicted RBP17.1■□□□□ 0.33
DDR1-229ENST00000396342 TIGD1Q96MW7 591 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 FBRSQ9HAH7 460 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 COQ4Q9Y3A0 265 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 SPAG17Q6Q759 2223 aa17.1■□□□□ 0.33
DDR1-229ENST00000396342 A0A1B0GTW7 788 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 TSPAN3O60637 253 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 KRT37O76014 449 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 FBXO21O94952 628 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 GNA14O95837 355 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 KLKB1P03952 638 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 NCAM1P13591 858 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 CBWD6Q4V339 395 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 CBWD3Q5JTY5 395 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 CBWD5Q5RIA9 395 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms