RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 RGMBQ6NW40 437 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 KCTD13Q8WZ19 329 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 TRIB2Q92519 343 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 SENP8Q96LD8 212 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 PAAF1Q9BRP4 392 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 FAM167BQ9BTA0 163 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 SENP6Q9GZR1 1112 aaPredicted RBP14.45□□□□□ -0.1
SNCA-204ENST00000394989 ACTR5Q9H9F9 607 aaPredicted RBP14.45□□□□□ -0.1
SNCA-204ENST00000394989 DDX43Q9NXZ2 648 aaKnown RBP14.45□□□□□ -0.1
SNCA-204ENST00000394989 STK38LQ9Y2H1 464 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 TIMM13Q9Y5L4 95 aaPredicted RBP14.45□□□□□ -0.1
SNCA-204ENST00000394989 TRPV2Q9Y5S1 764 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 FYNP06241 537 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 GHRP10912 638 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 CACNA2D1P54289 1103 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 MAP3K7CLP57077 242 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 MTFR1Q15390 333 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 SPATA21Q7Z572 469 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 NETO2Q8NC67 525 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 OLFM3Q96PB7 478 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 QKIQ96PU8 341 aaKnown RBP eCLIP14.45□□□□□ -0.1
SNCA-204ENST00000394989 NPY6RQ99463 290 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 MTG1Q9BT17 334 aaPredicted RBP14.45□□□□□ -0.1
SNCA-204ENST00000394989 POPDC2Q9HBU9 364 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 NOD2Q9HC29 1040 aa14.45□□□□□ -0.1
SNCA-204ENST00000394989 NRP1O14786 923 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 DAB1O75553 588 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 GCATO75600 419 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 MSH2P43246 934 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 NR2C2P49116 596 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 MGAT5Q09328 741 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 XRCC4Q13426 336 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 FAM47EQ6ZV65 393 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 CDKL3Q8IVW4 592 aaPredicted RBP14.44□□□□□ -0.1
SNCA-204ENST00000394989 CYTH2Q99418 400 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 KLC2Q9H0B6 622 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 C12orf65Q9H3J6 166 aaKnown RBP14.44□□□□□ -0.1
SNCA-204ENST00000394989 AGO3Q9H9G7 860 aaKnown RBP14.44□□□□□ -0.1
SNCA-204ENST00000394989 SLC12A4Q9UP95 1085 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 ARL5CA6NH57 179 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 FAM155AB1AL88 458 aaPredicted RBP14.44□□□□□ -0.1
SNCA-204ENST00000394989 SLC10A3P09131 477 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 VAV1P15498 845 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 MAGEA3P43357 314 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 DNAJC3Q13217 504 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 AGMOQ6ZNB7 445 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 GPRIN1Q7Z2K8 1008 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 KCNK16Q96T55 309 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 KLF6Q99612 283 aaPredicted RBP14.44□□□□□ -0.1
SNCA-204ENST00000394989 TRIM56Q9BRZ2 755 aaKnown RBP14.44□□□□□ -0.1
SNCA-204ENST00000394989 ZFYVE28Q9HCC9 887 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 SSU72Q9NP77 194 aaKnown RBP14.44□□□□□ -0.1
SNCA-204ENST00000394989 SLCO1B3Q9NPD5 702 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 ARHGEF4Q9NR80 690 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 KRT82Q9NSB4 513 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.44□□□□□ -0.1
SNCA-204ENST00000394989 TTLL3Q9Y4R7 772 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 BPTFQ12830 3046 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 MYBPHLA2RUH7 354 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 GOLGA8RI6L899 631 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 DGKIO75912 1065 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 AMHP03971 560 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 YWHAGP61981 247 aaKnown RBP eCLIP14.44□□□□□ -0.1
SNCA-204ENST00000394989 MGAT3Q09327 533 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 SPARCL1Q14515 664 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 CTU1Q7Z7A3 348 aaKnown RBP14.44□□□□□ -0.1
SNCA-204ENST00000394989 SERINC5Q86VE9 423 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 ZMIZ2Q8NF64 920 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 SLC44A1Q8WWI5 657 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 RSRC1Q96IZ7 334 aaKnown RBP14.44□□□□□ -0.1
SNCA-204ENST00000394989 ZIC5Q96T25 663 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 PIGVQ9NUD9 493 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 GABRQQ9UN88 632 aa14.44□□□□□ -0.1
SNCA-204ENST00000394989 SYNJ2BP-COX16A0A087WUM0 186 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 MFSD11O43934 449 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 THP07101 528 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 ATP2A2P16615 1042 aaKnown RBP14.43□□□□□ -0.1
SNCA-204ENST00000394989 ZFXP17010 805 aaPredicted RBP14.43□□□□□ -0.1
SNCA-204ENST00000394989 NOS2P35228 1153 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 GRIA1P42261 906 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 TKTL1P51854 596 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 TRIM32Q13049 653 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 PDK4Q16654 411 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 WLSQ5T9L3 541 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 RGS9BPQ6ZS82 235 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 KIF2BQ8N4N8 673 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 ZNF276Q8N554 614 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 BANPQ8N9N5 519 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 PCED1BQ96HM7 432 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 RMDN2Q96LZ7 410 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 SLC2A13Q96QE2 648 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 LGMNQ99538 433 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 SMOQ99835 787 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 PNPLA8Q9NP80 782 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 ANLNQ9NQW6 1124 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 COX16Q9P0S2 106 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 I6L893 689 aaPredicted RBP14.43□□□□□ -0.1
SNCA-204ENST00000394989 M0QZ92 97 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 SCNN1GP51170 649 aa14.43□□□□□ -0.1
SNCA-204ENST00000394989 SH2D5Q6ZV89 423 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms