RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 KRT13P13646 458 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 CCDC130P13994 396 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 OXCT1P55809 520 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 PPP3CAQ08209 521 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 BST2Q10589 180 aaKnown RBP6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 ANO7Q6IWH7 933 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 FAM186BQ8IYM0 893 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 HDDC3Q8N4P3 179 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 ENGASEQ8NFI3 743 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 CCDC34Q96HJ3 373 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 TWNKQ96RR1 684 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 RSPH9Q9H1X1 276 aaPredicted RBP6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 PRDM16Q9HAZ2 1276 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 METTL14Q9HCE5 456 aaKnown RBP6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 HMGXB4Q9UGU5 601 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 AGO1Q9UL18 857 aaKnown RBP6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 ZMIZ1Q9ULJ6 1067 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 STRIP2Q9ULQ0 834 aa6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 APOBEC2Q9Y235 224 aaKnown RBP6.53□□□□□ -1.36
SMARCAD1-203ENST00000394961 ZBTB24O43167 697 aaPredicted RBP6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 CYP26A1O43174 497 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 KLKB1P03952 638 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 DHPSP49366 369 aaPredicted RBP6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 KDSRQ06136 332 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 INAVAQ3KP66 663 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 FAM173BQ6P4H8 233 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 SLC39A13Q96H72 371 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 BBS2Q9BXC9 721 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 RAB20Q9NX57 234 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 SRRM3A6NNA2 597 aaPredicted RBP6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 SART1O43290 800 aaKnown RBP6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 CYBBP04839 570 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 HOXD9P28356 352 aaPredicted RBP6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 SCNN1AP37088 669 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 CASP4P49662 377 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 PGFP49763 221 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 CDH8P55286 799 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 SEC13P55735 322 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 MAP3K7CLP57077 242 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 YWHAGP61981 247 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 BNC1Q01954 994 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 STARD3Q14849 445 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 C2orf27AQ580R0 203 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 ZNF658Q5TYW1 1059 aaPredicted RBP6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 TCEAL6Q6IPX3 200 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 TOGARAM2Q6ZUX3 1019 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 UNC45BQ8IWX7 931 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 MINDY1Q8N5J2 469 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 FIBINQ8TAL6 211 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 TCEAL3Q969E4 200 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 IGSF8Q969P0 613 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 CCDC127Q96BQ5 260 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 P2RY11Q96G91 374 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 TBATAQ96M53 351 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 ELOVL2Q9NXB9 296 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 WDFY4Q6ZS81 3184 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 TBC1D3BA6NDS4 549 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 GLI1P08151 1106 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 KRT85P78386 507 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 GCNT1Q02742 428 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 RPL6Q02878 288 aaKnown RBP6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 BIRC3Q13489 604 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 CNGA2Q16280 664 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 PPP1R26Q5T8A7 1209 aaPredicted RBP6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 NUGGCQ68CJ6 796 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 KANSL1Q7Z3B3 1105 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 PROSER1Q86XN7 944 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 MIB1Q86YT6 1006 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 SFTPA1Q8IWL2 248 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 CCDC33Q8N5R6 958 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 SLC35F5Q8WV83 523 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 DHTKD1Q96HY7 919 aaPredicted RBP6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 TPSD1Q9BZJ3 242 aa6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 NXF1Q9UBU9 619 aaKnown RBP6.52□□□□□ -1.37
SMARCAD1-203ENST00000394961 A0A087WV48 116 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 VILLO15195 856 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 RNGTTO60942 597 aaKnown RBP6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 ZBED1O96006 694 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 ITPKAP23677 461 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 NR2F2P24468 414 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 PTGER3P43115 390 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 RXRGP48443 463 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 DAOAP59103 153 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 SMAD1Q15797 465 aaKnown RBP6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 FUT11Q495W5 492 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 ADGRF1Q5T601 910 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 ADIPOR2Q86V24 386 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 NELFCDQ8IXH7 590 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 GALNT15Q8N3T1 639 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 PDILTQ8N807 584 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 TAS1R2Q8TE23 839 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 PIGKQ92643 395 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 IFT43Q96FT9 208 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 LHX5Q9H2C1 402 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 USP29Q9HBJ7 922 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 CISHQ9NSE2 258 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 TOR4AQ9NXH8 423 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 TJP2Q9UDY2 1190 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 O00370 1275 aa6.51□□□□□ -1.37
SMARCAD1-203ENST00000394961 CD27P26842 260 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms