RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 GTF3C2Q8WUA4 911 aaPredicted RBP18.98■□□□□ 0.63
PCDHA1-202ENST00000394633 MTBPQ96DY7 904 aa18.98■□□□□ 0.63
PCDHA1-202ENST00000394633 SIGLEC10Q96LC7 697 aa18.98■□□□□ 0.63
PCDHA1-202ENST00000394633 PANX3Q96QZ0 392 aa18.98■□□□□ 0.63
PCDHA1-202ENST00000394633 VCXQ9H320 206 aa18.98■□□□□ 0.63
PCDHA1-202ENST00000394633 CYP3A43Q9HB55 503 aa18.98■□□□□ 0.63
PCDHA1-202ENST00000394633 TNFSF13BQ9Y275 285 aa18.98■□□□□ 0.63
PCDHA1-202ENST00000394633 FAM159BA6NKW6 160 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 SPECC1L-ADORA2AF8WAN1 911 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 TM7SF2O76062 418 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 TOP3BO95985 862 aaKnown RBP18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 PFKMP08237 780 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 GSTA2P09210 222 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 IQCF3P0C7M6 154 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 ADORA2AP29274 412 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 CRHR1P34998 444 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 ALDH18A1P54886 795 aaKnown RBP18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 HSDL1Q3SXM5 330 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 RIPOR1Q6ZS17 1223 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 LRRC39Q96DD0 335 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 GPR20Q99678 358 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 SPATS2LQ9NUQ6 558 aaKnown RBP18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 CPA4Q9UI42 421 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 FAM155AB1AL88 458 aaPredicted RBP18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 METTL18O95568 372 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 FESP07332 822 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 ZCCHC23Q6ZST2 131 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 FBXO16Q8IX29 292 aaPredicted RBP18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 ULK2Q8IYT8 1036 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 SPDYE1Q8NFV5 336 aaPredicted RBP18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 GSDMBQ8TAX9 411 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 RAB3IL1Q8TBN0 382 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 TEKT4Q8WW24 435 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 IFT43Q96FT9 208 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 ZNF184Q99676 751 aaPredicted RBP18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 SNRNP25Q9BV90 132 aaKnown RBP18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 VRTNQ9H8Y1 702 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 NGRNQ9NPE2 291 aaKnown RBP18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 TSPAN16Q9UKR8 245 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 ANGPTL2Q9UKU9 493 aa18.97■□□□□ 0.63
PCDHA1-202ENST00000394633 PRR5-ARHGAP8B1AHC4 643 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 AHCYL1O43865 530 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 LGR5O75473 907 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 SLC10A3P09131 477 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 STAG3L1P0CL83 205 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 TGFB3P10600 412 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 RGS7P49802 495 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 NDST1P52848 882 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 CCNA1P78396 465 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 ARHGAP8P85298 464 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 BOLA3Q53S33 107 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 MYLK4Q86YV6 388 aaPredicted RBP18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 ADGRF2Q8IZF7 708 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 PHC3Q8NDX5 983 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 STKLD1Q8NE28 680 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 FAM172AQ8WUF8 416 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 GATA6Q92908 595 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 TSC22D3Q99576 134 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 EBNA1BP2Q99848 306 aaKnown RBP18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 EBF4Q9BQW3 602 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 THTPAQ9BU02 230 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 SCOCQ9UIL1 159 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 MAD1L1Q9Y6D9 718 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 TLL2Q9Y6L7 1015 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 BIRC5O15392 142 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 SMIM24O75264 130 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 ANPEPP15144 967 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 ATICP31939 592 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 CLCN3P51790 818 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 STX3Q13277 289 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 FAM110CQ1W6H9 321 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 TRMT5Q32P41 509 aaKnown RBP18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 THEMIS2Q5TEJ8 643 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 RNF220Q5VTB9 566 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 LCLAT1Q6UWP7 414 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 HPDLQ96IR7 371 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 SLC7A8Q9UHI5 535 aa18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 ABT1Q9ULW3 272 aaKnown RBP18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 BARX2Q9UMQ3 279 aaPredicted RBP18.96■□□□□ 0.63
PCDHA1-202ENST00000394633 ZSWIM8A7E2V4 1837 aa18.95■□□□□ 0.62
PCDHA1-202ENST00000394633 DPYSL4O14531 572 aa18.95■□□□□ 0.62
PCDHA1-202ENST00000394633 CIB2O75838 187 aa18.95■□□□□ 0.62
PCDHA1-202ENST00000394633 ERFP50548 548 aa18.95■□□□□ 0.62
PCDHA1-202ENST00000394633 UBAP2LQ14157 1087 aaKnown RBP18.95■□□□□ 0.62
PCDHA1-202ENST00000394633 DNAL1Q4LDG9 190 aa18.95■□□□□ 0.62
PCDHA1-202ENST00000394633 GPR142Q7Z601 462 aa18.95■□□□□ 0.62
PCDHA1-202ENST00000394633 EXOC8Q8IYI6 725 aa18.95■□□□□ 0.62
PCDHA1-202ENST00000394633 USP6NLQ92738 828 aa18.95■□□□□ 0.62
PCDHA1-202ENST00000394633 RILPQ96NA2 401 aa18.95■□□□□ 0.62
PCDHA1-202ENST00000394633 PIDD1Q9HB75 910 aa18.95■□□□□ 0.62
PCDHA1-202ENST00000394633 SDR42E2A6NKP2 422 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 SERPINA6P08185 405 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 GRIA1P42261 906 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 ACTR3P61158 418 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 SATB1Q01826 763 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 INCA1Q0VD86 236 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 WASHC5Q12768 1159 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 TBCCQ15814 346 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 PCDHA11Q9Y5I1 949 aa18.94■□□□□ 0.62
PCDHA1-202ENST00000394633 CEP350Q5VT06 3117 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms