RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 KLF1Q13351 362 aaPredicted RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 HLTFQ14527 1009 aaKnown RBP eCLIP7.23□□□□□ -1.25
RTN4-205ENST00000394609 ZKSCAN8Q15776 578 aaPredicted RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 LRRC26Q2I0M4 334 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 C11orf91Q3C1V1 193 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 FAM153CQ494X1 144 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 FAM171BQ6P995 826 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 SPOCD1Q6ZMY3 1216 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 SND1Q7KZF4 910 aaKnown RBP eCLIP7.23□□□□□ -1.253e-12■■■■□ 21.6
RTN4-205ENST00000394609 SLC26A9Q7LBE3 791 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 TMCO2Q7Z6W1 182 aaPredicted RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 JAMLQ86YT9 394 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 ZDHHC17Q8IUH5 632 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 SIX6OS1Q8N1H7 587 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 MAB21L3Q8N8X9 362 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 KCTD6Q8NC69 237 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 ZMIZ2Q8NF64 920 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 APBB2Q92870 758 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 HAUS1Q96CS2 278 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 SGSM3Q96HU1 749 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 RBM41Q96IZ5 413 aaKnown RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 CALN1Q9BXU9 219 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 ULBP1Q9BZM6 244 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 PRDM5Q9NQX1 630 aaPredicted RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 GPATCH2LQ9NWQ4 482 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 DDX56Q9NY93 547 aaKnown RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 BCCIPQ9P287 314 aaKnown RBP eCLIP7.23□□□□□ -1.25
RTN4-205ENST00000394609 SAE1Q9UBE0 346 aaPredicted RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 FAM153AQ9UHL3 310 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 TBX21Q9UL17 535 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 UTP11Q9Y3A2 253 aaKnown RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 TET1Q8NFU7 2136 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 SYNJ2BP-COX16A0A087WUM0 186 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 C5orf60A6NFR6 353 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 ANKRD65E5RJM6 399 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 TJP3O95049 919 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 KDELR1P24390 212 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 ITGB8P26012 769 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 GPC1P35052 558 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 PCK1P35558 622 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 MDH1P40925 334 aaKnown RBP7.22□□□□□ -1.25
RTN4-205ENST00000394609 CETN2P41208 172 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 CDKN2BP42772 138 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 SLC11A1P49279 550 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 HDAC4P56524 1084 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 YWHAZP63104 245 aaKnown RBP7.22□□□□□ -1.25
RTN4-205ENST00000394609 PITX1P78337 314 aaPredicted RBP7.22□□□□□ -1.25
RTN4-205ENST00000394609 MRPS5P82675 430 aaKnown RBP7.22□□□□□ -1.25
RTN4-205ENST00000394609 TSPY1Q01534 308 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 XRCC4Q13426 336 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 RIPK1Q13546 671 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 ACAP1Q15027 740 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 TRIP13Q15645 432 aaPredicted RBP7.22□□□□□ -1.25
RTN4-205ENST00000394609 SNCBQ16143 134 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 PPP2R5EQ16537 467 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 CYP1B1Q16678 543 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 DCAF6Q58WW2 860 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 TTMPQ5BVD1 217 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 ZC3H12AQ5D1E8 599 aaKnown RBP7.22□□□□□ -1.25
RTN4-205ENST00000394609 TFDP3Q5H9I0 405 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 CEP85LQ5SZL2 805 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 FAM171A1Q5VUB5 890 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 SYPL2Q5VXT5 272 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 HFE2Q6ZVN8 426 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 CYP4V2Q6ZWL3 525 aaPredicted RBP7.22□□□□□ -1.25
RTN4-205ENST00000394609 POLNQ7Z5Q5 900 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 TMEM173Q86WV6 379 aaPredicted RBP7.22□□□□□ -1.25
RTN4-205ENST00000394609 NPAS4Q8IUM7 802 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 DEFB106AQ8N104 65 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 CCHCR1Q8TD31 782 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 ZNF473Q8WTR7 871 aaKnown RBP7.22□□□□□ -1.25
RTN4-205ENST00000394609 RIN2Q8WYP3 895 aaPredicted RBP7.22□□□□□ -1.25
RTN4-205ENST00000394609 KCTD13Q8WZ19 329 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 ARMC5Q96C12 935 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 VWCEQ96DN2 955 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 SMARCD1Q96GM5 515 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 PKMYT1Q99640 499 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 ERP44Q9BS26 406 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 MAGEB5Q9BZ81 275 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 GPR62Q9BZJ7 368 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 DCLK3Q9C098 648 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 C11orf49Q9H6J7 331 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 LRRC19Q9H756 370 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.22□□□□□ -1.25
RTN4-205ENST00000394609 COX16Q9P0S2 106 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 PCYOX1Q9UHG3 505 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 SNX24Q9Y343 169 aa7.22□□□□□ -1.25
RTN4-205ENST00000394609 PDCD11Q14690 1871 aaKnown RBP7.22□□□□□ -1.25
RTN4-205ENST00000394609 hCG_1818297A0A087WSY0 165 aa7.21□□□□□ -1.25
RTN4-205ENST00000394609 YJEFN3A6XGL0 299 aa7.21□□□□□ -1.25
RTN4-205ENST00000394609 HHLA1C9JL84 531 aa7.21□□□□□ -1.25
RTN4-205ENST00000394609 E7ENQ6 273 aa7.21□□□□□ -1.25
RTN4-205ENST00000394609 TMEM189-UBE2V1I3L0A0 370 aa7.21□□□□□ -1.25
RTN4-205ENST00000394609 TRAPPC3O43617 180 aa7.21□□□□□ -1.25
RTN4-205ENST00000394609 ECEL1O95672 775 aa7.21□□□□□ -1.25
RTN4-205ENST00000394609 GALTP07902 379 aa7.21□□□□□ -1.25
RTN4-205ENST00000394609 GSTA1P08263 222 aa7.21□□□□□ -1.25
RTN4-205ENST00000394609 CLTBP09497 229 aa7.21□□□□□ -1.25
RTN4-205ENST00000394609 TYMPP19971 482 aa7.21□□□□□ -1.25
RTN4-205ENST00000394609 NR1D1P20393 614 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms