RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 SRGAP2CP0DJJ0 459 aa16.94■□□□□ 0.3
EFEMP1-202ENST00000394555 SRGAP2BP0DMP2 458 aa16.94■□□□□ 0.3
EFEMP1-202ENST00000394555 CD1EP15812 388 aa16.94■□□□□ 0.3
EFEMP1-202ENST00000394555 CDK18Q07002 472 aa16.94■□□□□ 0.3
EFEMP1-202ENST00000394555 KBTBD6Q86V97 674 aa16.94■□□□□ 0.3
EFEMP1-202ENST00000394555 RNF148Q8N7C7 305 aa16.94■□□□□ 0.3
EFEMP1-202ENST00000394555 RAB3IL1Q8TBN0 382 aa16.94■□□□□ 0.3
EFEMP1-202ENST00000394555 ADPGKQ9BRR6 497 aa16.94■□□□□ 0.3
EFEMP1-202ENST00000394555 RNPEPQ9H4A4 650 aa16.94■□□□□ 0.3
EFEMP1-202ENST00000394555 AK5Q9Y6K8 562 aa16.94■□□□□ 0.3
EFEMP1-202ENST00000394555 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 TPP1O14773 563 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 ATP5BP06576 529 aaKnown RBP16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 ACTR2P61160 394 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 MRPS22P82650 360 aaKnown RBP16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 HPCAP84074 193 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 SNAPC2Q13487 334 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 ITGA9Q13797 1035 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 MYLK3Q32MK0 819 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 PPM1JQ5JR12 505 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 BSPRYQ5W0U4 402 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 PQLC1Q8N2U9 271 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 SNRNP27Q8WVK2 155 aaKnown RBP16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 LRGUKQ96M69 825 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 BTBD9Q96Q07 612 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 NRDE2Q9H7Z3 1164 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 JPH1Q9HDC5 661 aaPredicted RBP16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 EMCNQ9ULC0 261 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 PCDHGC3Q9UN70 934 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 SPDYE16A6NNV3 312 aaPredicted RBP16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 CRTAMO95727 393 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 PIM1P11309 404 aaPredicted RBP16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 L1CAMP32004 1257 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 ARRB2P32121 409 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 BCAR1P56945 870 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 COG7P83436 770 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 TFDP2Q14188 446 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 PLD5Q8N7P1 536 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 ARHGAP26Q9UNA1 814 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 SH3BP1Q9Y3L3 701 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 NR2E3Q9Y5X4 410 aa16.93■□□□□ 0.3
EFEMP1-202ENST00000394555 COX4I1P13073 169 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 CDH5P33151 784 aaPredicted RBP16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 SERPINB5P36952 375 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 GABRB2P47870 512 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 GALK1P51570 392 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 C6orf52Q5T4I8 152 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 PGBD4Q96DM1 585 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 MRPL1Q9BYD6 325 aaKnown RBP16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 SDCBP2Q9H190 292 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 AP4B1Q9Y6B7 739 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 H0YIN7 160 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 CFLARO15519 480 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 METTL18O95568 372 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 PCSK6P29122 969 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 PDE1CQ14123 709 aaPredicted RBP16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 TMEM259Q4ZIN3 620 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 OGFRL1Q5TC84 451 aaPredicted RBP16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 UBA3Q8TBC4 463 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 PRPF31Q8WWY3 499 aaKnown RBP16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 CLMNQ96JQ2 1002 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 OXCT2Q9BYC2 517 aaPredicted RBP16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 Q9H521 79 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 COPS7BQ9H9Q2 264 aaPredicted RBP16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 ZNF358Q9NW07 568 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 ASNSD1Q9NWL6 643 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 MKS1Q9NXB0 559 aa16.92■□□□□ 0.3
EFEMP1-202ENST00000394555 PRPSAP2O60256 369 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 DKC1O60832 514 aaKnown RBP eCLIP16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 NUDT2P50583 147 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 DUOXA2Q1HG44 320 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 FNIP1Q8TF40 1166 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 SIGLEC10Q96LC7 697 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 RNF157Q96PX1 679 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 SORT1Q99523 831 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 EBNA1BP2Q99848 306 aaKnown RBP16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 ZNF70Q9UC06 446 aaPredicted RBP16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 RIPK3Q9Y572 518 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 GOLGA8QA0A0J9YX86 632 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 GOLGA8OA6NCC3 632 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 FAM159BA6NKW6 160 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 GOLGA8NF8WBI6 632 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 ZBTB14O43829 449 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 DGKIO75912 1065 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 ALDOAP04075 364 aaKnown RBP16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 SERPINE1P05121 402 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 PDGFRAP16234 1089 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 PCLAFQ15004 111 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 MARVELD2Q8N4S9 558 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 FAM151AQ8WW52 585 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 ATP2A3Q93084 1043 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 KCNK16Q96T55 309 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 ACSS2Q9NR19 701 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 WDR27A2RRH5 827 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 CASQ2O14958 399 aaPredicted RBP16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 PLIN3O60664 434 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 ATG7O95352 703 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 KCNA2P16389 499 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 CCND2P30279 289 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms