RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 SCUBE3Q8IX30 993 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 ETFBKMTQ8IXQ9 262 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 FAM217AQ8IXS0 508 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 C1orf131Q8NDD1 294 aaKnown RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 DDX1Q92499 740 aaKnown RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 PCMTD1Q96MG8 357 aaPredicted RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 SPAG5Q96R06 1193 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 CPXM1Q96SM3 734 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 PNKPQ96T60 521 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 FAM126AQ9BYI3 521 aaPredicted RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 MIS12Q9H081 205 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 FBRSL1Q9HCM7 1045 aaKnown RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 ASNSD1Q9NWL6 643 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 MUC22E2RYF6 1773 aaPredicted RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 NUMA1Q14980 2115 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 CACNA1EQ15878 2313 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 DOCK9Q9BZ29 2069 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 A0A0A0MRY4 1105 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 PROB1E7EW31 1015 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 EPHB6O15197 1021 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 CACNG3O60359 315 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 RNF40O75150 1001 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 GFPT2O94808 682 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 IGLV3-27P01718 113 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 KLKB1P03952 638 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 FYNP06241 537 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 TDGF1P13385 188 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 NCAM1P13591 858 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 TYRP14679 529 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 STAT1P42224 750 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 GRIA2P42262 883 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 TNFRSF4P43489 277 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 SLC6A11P48066 632 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 HARS2P49590 506 aaKnown RBP8.92□□□□□ -0.98
APLF-202ENST00000394342 NRLP54845 237 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 ZNF445P59923 1031 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 SATB1Q01826 763 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 CSTF1Q05048 431 aaKnown RBP8.92□□□□□ -0.98
APLF-202ENST00000394342 RING1Q06587 406 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 ANO4Q32M45 955 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 EFHC1Q5JVL4 640 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 NUGGCQ68CJ6 796 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 Q6ZS52 159 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 NOP9Q86U38 636 aaKnown RBP8.92□□□□□ -0.98
APLF-202ENST00000394342 C12orf40Q86WS4 652 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 ZDHHC17Q8IUH5 632 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 DENND1CQ8IV53 801 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 UNC45BQ8IWX7 931 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 PHTF2Q8N3S3 785 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 CPXM2Q8N436 756 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 TMEM35BQ8NCS4 154 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 MSANTD4Q8NCY6 345 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 EPS8L1Q8TE68 723 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 IPO4Q8TEX9 1081 aaKnown RBP8.92□□□□□ -0.98
APLF-202ENST00000394342 EZH1Q92800 747 aaPredicted RBP8.92□□□□□ -0.98
APLF-202ENST00000394342 NELL1Q92832 810 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 AZIN2Q96A70 460 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 ACDQ96AP0 544 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 FAM149B1Q96BN6 582 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 SERPINB11Q96P15 392 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 XPO6Q96QU8 1125 aaKnown RBP8.92□□□□□ -0.98
APLF-202ENST00000394342 BBS2Q9BXC9 721 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 TMEM121BQ9BXQ6 578 aaPredicted RBP8.92□□□□□ -0.98
APLF-202ENST00000394342 IRX2Q9BZI1 471 aaPredicted RBP8.92□□□□□ -0.98
APLF-202ENST00000394342 PDCL3Q9H2J4 239 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 SEMA4AQ9H3S1 761 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 POPDC2Q9HBU9 364 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 CBX8Q9HC52 389 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 NLRC4Q9NPP4 1024 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 ARHGEF4Q9NR80 690 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 FAM86C1Q9NVL1 165 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 SFMBT1Q9UHJ3 866 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 STOML2Q9UJZ1 356 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 AGO1Q9UL18 857 aaKnown RBP8.92□□□□□ -0.98
APLF-202ENST00000394342 PCDHGA2Q9Y5H1 932 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 CEP250Q9BV73 2442 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 ANKRD36A6QL64 1941 aa8.92□□□□□ -0.98
APLF-202ENST00000394342 A0A1B0GTH6 734 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 NEDD8-MDP1E9PL57 170 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 K7EQS6 105 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 CAPN9O14815 690 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 TEX33O43247 280 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 MSI1O43347 362 aaKnown RBP8.91□□□□□ -0.98
APLF-202ENST00000394342 HSF2BPO75031 334 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 TULP3O75386 442 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 KAT7O95251 611 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 PENKP01210 267 aaPredicted RBP8.91□□□□□ -0.98
APLF-202ENST00000394342 ERBB2P04626 1255 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 CYBBP04839 570 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 HOXA6P31267 233 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 SCNN1AP37088 669 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 GABRB2P47870 512 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 TBX4P57082 545 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 YWHAZP63104 245 aaKnown RBP8.91□□□□□ -0.98
APLF-202ENST00000394342 MRPS21P82921 87 aaKnown RBP8.91□□□□□ -0.98
APLF-202ENST00000394342 CDR2Q01850 454 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 KDSRQ06136 332 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 HSF5Q4G112 596 aaPredicted RBP8.91□□□□□ -0.98
APLF-202ENST00000394342 PTPN20Q4JDL3 420 aa8.91□□□□□ -0.98
APLF-202ENST00000394342 TAF3Q5VWG9 929 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms