RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RDXP35241 583 aaKnown RBP15.6■□□□□ 0.09
GPC3-202ENST00000394299 GEMIN4P57678 1058 aaKnown RBP15.6■□□□□ 0.09
GPC3-202ENST00000394299 YWHAGP61981 247 aaKnown RBP eCLIP15.6■□□□□ 0.09
GPC3-202ENST00000394299 ECHDC2Q86YB7 292 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 SCAMP5Q8TAC9 235 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 PAFAH2Q99487 392 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 NCAPGQ9BPX3 1015 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 WDR6Q9NNW5 1121 aaKnown RBP15.6■□□□□ 0.09
GPC3-202ENST00000394299 CHADO15335 359 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 FAM155BO75949 473 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 CKBP12277 381 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 PGFP49763 221 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 LIG3P49916 1009 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 PTK7Q13308 1070 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 RAB41Q5JT25 222 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 TDRPQ86YL5 185 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 MPP5Q8N3R9 675 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 PCSK9Q8NBP7 692 aaKnown RBP15.6■□□□□ 0.09
GPC3-202ENST00000394299 CABS1Q96KC9 395 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 PLAC1Q9HBJ0 212 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 FGFR1OP2Q9NVK5 253 aa15.6■□□□□ 0.09
GPC3-202ENST00000394299 TCRBV9S1A1TA0A576 114 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 DGKIO75912 1065 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 DDHD2O94830 711 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 FAM163BP0C2L3 166 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 FOXN2P32314 431 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 RPA3P35244 121 aaPredicted RBP15.59■□□□□ 0.09
GPC3-202ENST00000394299 ADRA1BP35368 520 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 ZKSCAN8Q15776 578 aaPredicted RBP15.59■□□□□ 0.09
GPC3-202ENST00000394299 KBTBD12Q3ZCT8 623 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 GKAP1Q5VSY0 366 aaPredicted RBP15.59■□□□□ 0.09
GPC3-202ENST00000394299 DENND5BQ6ZUT9 1274 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 VSIG1Q86XK7 387 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 RSPH1Q8WYR4 309 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 ACSS3Q9H6R3 686 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 DDIT4Q9NX09 232 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 SRRDQ9UH36 339 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 GRID1Q9ULK0 1009 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 STAP1Q9ULZ2 295 aa15.59■□□□□ 0.09
GPC3-202ENST00000394299 NDC80O14777 642 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 LTFP02788 710 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 ODC1P11926 461 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 CST5P28325 142 aaPredicted RBP15.58■□□□□ 0.09
GPC3-202ENST00000394299 STX2P32856 288 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 AP1B1Q10567 949 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 TUSC3Q13454 348 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 HEATR6Q6AI08 1181 aaKnown RBP15.58■□□□□ 0.09
GPC3-202ENST00000394299 RNF180Q86T96 592 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 ZNF598Q86UK7 904 aaKnown RBP15.58■□□□□ 0.09
GPC3-202ENST00000394299 CDKL3Q8IVW4 592 aaPredicted RBP15.58■□□□□ 0.09
GPC3-202ENST00000394299 CACNA2D3Q8IZS8 1091 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 CCNYQ8ND76 341 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 DCAKDQ8WVC6 231 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 CKAP2Q8WWK9 683 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 SMARCD1Q96GM5 515 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 CAPNS2Q96L46 248 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 CCDC134Q9H6E4 229 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.58■□□□□ 0.092e-13■□□□□ 11.2
GPC3-202ENST00000394299 SEPT10Q9P0V9 454 aa15.58■□□□□ 0.09
GPC3-202ENST00000394299 PSMC3IPQ9P2W1 217 aaPredicted RBP15.58■□□□□ 0.09
GPC3-202ENST00000394299 MYO18AQ92614 2054 aaKnown RBP15.58■□□□□ 0.09
GPC3-202ENST00000394299 CFAP69A5D8W1 941 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 PCSK1P29120 753 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 PHBP35232 272 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 NOGQ13253 232 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 SLC1A5Q15758 541 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 INTS6LQ5JSJ4 861 aaKnown RBP15.58■□□□□ 0.08
GPC3-202ENST00000394299 NUGGCQ68CJ6 796 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 FAM171BQ6P995 826 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 ZNF534Q76KX8 674 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 RIBC1Q8N443 379 aaPredicted RBP15.58■□□□□ 0.08
GPC3-202ENST00000394299 TFB1MQ8WVM0 346 aaKnown RBP15.58■□□□□ 0.08
GPC3-202ENST00000394299 HTR3CQ8WXA8 447 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 LINC01599Q8WXQ3 324 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 SPOCK2Q92563 424 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 OLFM3Q96PB7 478 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 QKIQ96PU8 341 aaKnown RBP eCLIP15.58■□□□□ 0.082e-7■■■■□ 22.6
GPC3-202ENST00000394299 KLC2Q9H0B6 622 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 CNGB3Q9NQW8 809 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 GGT7Q9UJ14 662 aa15.58■□□□□ 0.08
GPC3-202ENST00000394299 CXorf49A8MYA2 514 aaPredicted RBP15.57■□□□□ 0.08
GPC3-202ENST00000394299 ZNF487B1APH4 448 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 EEF2KO00418 725 aaKnown RBP15.57■□□□□ 0.08
GPC3-202ENST00000394299 GCATO75600 419 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 ZFXP17010 805 aaPredicted RBP15.57■□□□□ 0.08
GPC3-202ENST00000394299 KRT4P19013 534 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 NR2C2P49116 596 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 RAB27AP51159 221 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 ANKRD20A2Q5SQ80 823 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 MAP3K21Q5TCX8 1036 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 ANKRD20A1Q5TYW2 823 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 ANKRD20A3Q5VUR7 823 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 OVOS1Q6IE37 1185 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 TRAF7Q6Q0C0 670 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 ADGRD1Q6QNK2 874 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 PIGWQ7Z7B1 504 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 OTUD6BQ8N6M0 293 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 DEPDC1BQ8WUY9 529 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 ACBD6Q9BR61 282 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 PRDM12Q9H4Q4 367 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms