RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 PPP2R2AP63151 447 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 BASP1P80723 227 aaKnown RBP18.3■□□□□ 0.52
SHTN1-203ENST00000392901 DDR2Q16832 855 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 LONRF1Q17RB8 773 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 HP1BP3Q5SSJ5 553 aaPredicted RBP18.3■□□□□ 0.52
SHTN1-203ENST00000392901 NCBP2-AS2Q69YL0 99 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 PCGF5Q86SE9 256 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 TMEM173Q86WV6 379 aaPredicted RBP18.3■□□□□ 0.52
SHTN1-203ENST00000392901 CPT1BQ92523 772 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 PGM2Q96G03 612 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 CRISPLD2Q9H0B8 497 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 NLRC5Q86WI3 1866 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 TNFRSF10BO14763 440 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 RASGRF2O14827 1237 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 AMHP03971 560 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 GALTP07902 379 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 GPR15P49685 360 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 NFE2Q16621 373 aaPredicted RBP18.3■□□□□ 0.52
SHTN1-203ENST00000392901 C6orf118Q5T5N4 469 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 ANKRD22Q5VYY1 191 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 FUT10Q6P4F1 479 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 PRCCQ92733 491 aaPredicted RBP18.3■□□□□ 0.52
SHTN1-203ENST00000392901 TOX2Q96NM4 488 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 SLC9A7Q96T83 725 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 MRPL9Q9BYD2 267 aaKnown RBP18.3■□□□□ 0.52
SHTN1-203ENST00000392901 WDCPQ9H6R7 721 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 SAYSD1Q9NPB0 183 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 ARHGEF4Q9NR80 690 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 RRN3Q9NYV6 651 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 SLC12A6Q9UHW9 1150 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 FBXW11Q9UKB1 542 aa18.3■□□□□ 0.52
SHTN1-203ENST00000392901 H3BRJ5 948 aa18.29■□□□□ 0.52
SHTN1-203ENST00000392901 I6L893 689 aaPredicted RBP18.29■□□□□ 0.52
SHTN1-203ENST00000392901 RGS16O15492 202 aaPredicted RBP18.29■□□□□ 0.52
SHTN1-203ENST00000392901 GAD2Q05329 585 aa18.29■□□□□ 0.52
SHTN1-203ENST00000392901 AUHQ13825 339 aaKnown RBP18.29■□□□□ 0.52
SHTN1-203ENST00000392901 PPIL6Q8IXY8 311 aa18.29■□□□□ 0.52
SHTN1-203ENST00000392901 ATAD1Q8NBU5 361 aa18.29■□□□□ 0.52
SHTN1-203ENST00000392901 NETO2Q8NC67 525 aa18.29■□□□□ 0.52
SHTN1-203ENST00000392901 PGAP3Q96FM1 320 aaPredicted RBP18.29■□□□□ 0.52
SHTN1-203ENST00000392901 FOXP3Q9BZS1 431 aa18.29■□□□□ 0.52
SHTN1-203ENST00000392901 SHOC2Q9UQ13 582 aa18.29■□□□□ 0.52
SHTN1-203ENST00000392901 FARP1Q9Y4F1 1045 aaPredicted RBP18.29■□□□□ 0.52
SHTN1-203ENST00000392901 SF3B1O75533 1304 aaKnown RBP eCLIP18.29■□□□□ 0.528e-10■■■■■ 160.8
SHTN1-203ENST00000392901 TCRBV7S3A2A0A539 114 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 FAM72CH0Y354 149 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 PARNO95453 639 aaKnown RBP18.28■□□□□ 0.52
SHTN1-203ENST00000392901 MAGEA4P43358 317 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 NR2C2P49116 596 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 PGFP49763 221 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 YWHAGP61981 247 aaKnown RBP eCLIP18.28■□□□□ 0.52
SHTN1-203ENST00000392901 SYCP2LQ5T4T6 812 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 FAM72AQ5TYM5 149 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 FAM72DQ6L9T8 149 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 ZNF280DQ6N043 979 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 KCNT2Q6UVM3 1135 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 TAC4Q86UU9 113 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 FAM72BQ86X60 149 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 SCML4Q8N228 414 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 ARFGAP2Q8N6H7 521 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 RNF34Q969K3 372 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 TMEM39AQ9NV64 488 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 DTLQ9NZJ0 730 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 RCOR3Q9P2K3 495 aaPredicted RBP18.28■□□□□ 0.52
SHTN1-203ENST00000392901 PCDHB5Q9Y5E4 795 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 PTPRDP23468 1912 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 BCLAF3A2AJT9 711 aaKnown RBP18.28■□□□□ 0.52
SHTN1-203ENST00000392901 EEF2KO00418 725 aaKnown RBP18.28■□□□□ 0.52
SHTN1-203ENST00000392901 F9P00740 461 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 LSP1P33241 339 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 MRPL58Q14197 206 aaKnown RBP18.28■□□□□ 0.52
SHTN1-203ENST00000392901 ARL13BQ3SXY8 428 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 BTBD8Q5XKL5 378 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 RELL1Q8IUW5 271 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 TTC9BQ8N6N2 239 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 NAT8LQ8N9F0 302 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 DQX1Q8TE96 717 aaKnown RBP18.28■□□□□ 0.52
SHTN1-203ENST00000392901 NTAN1Q96AB6 310 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 TKTL2Q9H0I9 626 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 NUDT5Q9UKK9 219 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 VWA8A3KMH1 1905 aa18.28■□□□□ 0.52
SHTN1-203ENST00000392901 NDC80O14777 642 aa18.27■□□□□ 0.52
SHTN1-203ENST00000392901 CPB1P15086 417 aa18.27■□□□□ 0.52
SHTN1-203ENST00000392901 FGFR3P22607 806 aa18.27■□□□□ 0.52
SHTN1-203ENST00000392901 MTM1Q13496 603 aa18.27■□□□□ 0.52
SHTN1-203ENST00000392901 FASTKD3Q14CZ7 662 aaKnown RBP18.27■□□□□ 0.52
SHTN1-203ENST00000392901 RTP2Q5QGT7 225 aa18.27■□□□□ 0.52
SHTN1-203ENST00000392901 RFX8Q6ZV50 586 aa18.27■□□□□ 0.52
SHTN1-203ENST00000392901 TAS1R1Q7RTX1 841 aa18.27■□□□□ 0.52
SHTN1-203ENST00000392901 GPR152Q8TDT2 470 aa18.27■□□□□ 0.52
SHTN1-203ENST00000392901 FUBP3Q96I24 572 aaKnown RBP eCLIP18.27■□□□□ 0.52
SHTN1-203ENST00000392901 ZNF333Q96JL9 665 aa18.27■□□□□ 0.52
SHTN1-203ENST00000392901 ROPN1BQ9BZX4 212 aaPredicted RBP18.27■□□□□ 0.52
SHTN1-203ENST00000392901 ROPN1Q9HAT0 212 aaPredicted RBP18.27■□□□□ 0.52
SHTN1-203ENST00000392901 CFAP69A5D8W1 941 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 SOAT2O75908 522 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 AIF1P55008 147 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 IKBKEQ14164 716 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 VSTM1Q6UX27 236 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 CEP128Q6ZU80 1094 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms