RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 RAB33AQ14088 237 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 RPS6KA1Q15418 735 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 ATF7IP2Q5U623 682 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 KRT79Q5XKE5 535 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 CGB2Q6NT52 195 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 TTI2Q6NXR4 508 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 PALB2Q86YC2 1186 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 LNX1Q8TBB1 728 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 ROPN1BQ9BZX4 212 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 ROPN1Q9HAT0 212 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 DNM3Q9UQ16 869 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 RFPL2O75678 378 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 T-ENOLP0DO92 83 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 EPHB2P29323 1055 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 TRPC1P48995 793 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 EHHADHQ08426 723 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 RCN1Q15293 331 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 MIIPQ5JXC2 388 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 PPM1LQ5SGD2 360 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 FAM171A1Q5VUB5 890 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 B3GNT6Q6ZMB0 384 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 ANKS3Q6ZW76 656 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 HS2ST1Q7LGA3 356 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 NANOGNBQ7Z5D8 188 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 RASGEF1CQ8N431 466 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 RIBC1Q8N443 379 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 SLC44A3Q8N4M1 653 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 C4orf32Q8N8J7 132 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 FLCNQ8NFG4 579 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 BSNDQ8WZ55 320 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 SHDQ96IW2 340 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 CGREF1Q99674 301 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 MAFFQ9ULX9 164 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 FADS3Q9Y5Q0 445 aa11.85□□□□□ -0.51
TRAF3IP2-208ENST00000392556 H0Y858 1186 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 MAPK13O15264 365 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 DCTN3O75935 186 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 PSMG1O95456 288 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 ZCCHC18P0CG32 403 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 NPR3P17342 541 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 FGFR3P22607 806 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 RFX1P22670 979 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 FSHRP23945 695 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 GRM5P41594 1212 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 POU5F1Q01860 360 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 DMP1Q13316 513 aaPredicted RBP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 XKR4Q5GH76 650 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 RTP2Q5QGT7 225 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 CDR2LQ86X02 465 aaPredicted RBP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 PASD1Q8IV76 773 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 ZBED8Q8IZ13 594 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 SIX5Q8N196 739 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 DTWD2Q8NBA8 298 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 LSM14AQ8ND56 463 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 FNDC8Q8TC99 324 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 GAB3Q8WWW8 586 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 PPP1R10Q96QC0 940 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 MYADMQ96S97 322 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 CLSTN3Q9BQT9 956 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 MRPL4Q9BYD3 311 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 BLZF1Q9H2G9 400 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 SYNCQ9H7C4 482 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 KRT82Q9NSB4 513 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 ZDHHC18Q9NUE0 388 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 ARHGEF38Q9NXL2 777 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 KCND2Q9NZV8 630 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 MTRRQ9UBK8 725 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 HAO1Q9UJM8 370 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 ZNF180Q9UJW8 692 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 CDH7Q9ULB5 785 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 KIAA1024Q9UPX6 916 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 GDAQ9Y2T3 454 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 TLDC2A0PJX2 215 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 TRIM49BA6NDI0 452 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 CASTOR2A6NHX0 329 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 H0YCG3 227 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 PSMA7O14818 248 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 PDGFRBP09619 1106 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 MCF2P10911 925 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 CDK4P11802 303 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 DRG2P55039 364 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 HTR4Q13639 388 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 AUHQ13825 339 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 GRM2Q14416 872 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 RSPO2Q6UXX9 243 aaPredicted RBP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 Q6ZNX1 250 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 DAAM2Q86T65 1068 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 CROCCP3Q8IVE0 287 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 SNX29Q8TEQ0 813 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 BHMTQ93088 406 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 ITPKCQ96DU7 683 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 MAGEB18Q96M61 343 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 PHOX2BQ99453 314 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 DDX50Q9BQ39 737 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 CUEDC2Q9H467 287 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 AVENQ9NQS1 362 aaPredicted RBP11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 SAR1AQ9NR31 198 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms