RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 SETD9Q8NE22 299 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 RPRD1BQ9NQG5 326 aaKnown RBP16.57■□□□□ 0.24
SHANK1-204ENST00000391814 DSEQ9UL01 958 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 IL12AP29459 219 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 RAP1GAPP47736 663 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 SHROOM1Q2M3G4 852 aaPredicted RBP16.57■□□□□ 0.24
SHANK1-204ENST00000391814 BROXQ5VW32 411 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 WDR41Q9HAD4 459 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 PIH1D1Q9NWS0 290 aaKnown RBP16.57■□□□□ 0.24
SHANK1-204ENST00000391814 SMIM31A0A1B0GVY4 71 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 CNTN1Q12860 1018 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 KCTD19Q17RG1 926 aaPredicted RBP16.57■□□□□ 0.24
SHANK1-204ENST00000391814 GRTP1Q5TC63 336 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 MZT2BQ6NZ67 158 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 RTKN2Q8IZC4 609 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 TCAIMQ8N3R3 496 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 URGCPQ8TCY9 931 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 MTG1Q9BT17 334 aaPredicted RBP16.57■□□□□ 0.24
SHANK1-204ENST00000391814 NT5C1AQ9BXI3 368 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 TLR10Q9BXR5 811 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 TDRD3Q9H7E2 651 aaKnown RBP16.57■□□□□ 0.24
SHANK1-204ENST00000391814 LRRC40Q9H9A6 602 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 RARBP10826 455 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 NNMTP40261 264 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 UGT3A1Q6NUS8 523 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 ALYREFQ86V81 257 aaKnown RBP16.57■□□□□ 0.24
SHANK1-204ENST00000391814 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.57■□□□□ 0.24
SHANK1-204ENST00000391814 EXD1Q8NHP7 514 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 C17orf50Q8WW18 174 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 POP1Q99575 1024 aaKnown RBP16.57■□□□□ 0.24
SHANK1-204ENST00000391814 AK5Q9Y6K8 562 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 KBTBD13C9JR72 458 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 CCNA2P20248 432 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 GLRA4Q5JXX5 417 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 BLOC1S5Q8TDH9 187 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 PIGBQ92521 554 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 RARAP10276 462 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 NEK10Q6ZWH5 1172 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 ZNF276Q8N554 614 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 UBXN6Q9BZV1 441 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 NUAK2Q9H093 628 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 POMKQ9H5K3 350 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 USP39Q53GS9 565 aaKnown RBP16.56■□□□□ 0.24
SHANK1-204ENST00000391814 SLC45A4Q5BKX6 768 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 ZNF605Q86T29 641 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 DDX53Q86TM3 631 aaKnown RBP16.56■□□□□ 0.24
SHANK1-204ENST00000391814 LDHDQ86WU2 507 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 APBB2Q92870 758 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 APOL2Q9BQE5 337 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 NCKIPSDQ9NZQ3 722 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 AFF2P51816 1311 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 ATP5BP06576 529 aaKnown RBP16.56■□□□□ 0.24
SHANK1-204ENST00000391814 TSPAN19P0C672 248 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 EPB42P16452 691 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 ADAM17P78536 824 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 TRIM74Q86UV6 250 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 TRIM73Q86UV7 250 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 NEDD1Q8NHV4 660 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 SLC2A4P14672 509 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 ITGAXP20702 1163 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 ITFG1Q8TB96 612 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 GPRASP2Q96D09 838 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 ERLEC1Q96DZ1 483 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 CNPY3Q9BT09 278 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 RWDD3Q9Y3V2 267 aa16.56■□□□□ 0.24
SHANK1-204ENST00000391814 MYL12BO14950 172 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 ANXA9O76027 345 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 CPB1P15086 417 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 PURAQ00577 322 aaKnown RBP16.55■□□□□ 0.24
SHANK1-204ENST00000391814 TWF1Q12792 350 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 QPRTQ15274 297 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 EML3Q32P44 896 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 LPCAT4Q643R3 524 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 ABRAXAS1Q6UWZ7 409 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 DLG3Q92796 817 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 NIF3L1Q9GZT8 377 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 MAP10Q9P2G4 905 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 USP18Q9UMW8 372 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 PDE2AO00408 941 aaPredicted RBP16.55■□□□□ 0.24
SHANK1-204ENST00000391814 NCAM1P13591 858 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 LRPAP1P30533 357 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 GEMP55040 296 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 TOP3AQ13472 1001 aaPredicted RBP16.55■□□□□ 0.24
SHANK1-204ENST00000391814 FBXW8Q8N3Y1 598 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 SUN5Q8TC36 379 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 S100ZQ8WXG8 99 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 TSEN34Q9BSV6 310 aaKnown RBP16.55■□□□□ 0.24
SHANK1-204ENST00000391814 UGT2B28Q9BY64 529 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 TMEM2Q9UHN6 1383 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 MAP3K4Q9Y6R4 1608 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 DBTP11182 482 aaKnown RBP16.55■□□□□ 0.24
SHANK1-204ENST00000391814 SKIV2L2P42285 1042 aaKnown RBP16.55■□□□□ 0.24
SHANK1-204ENST00000391814 ACADSBP45954 432 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 RFX3P48380 749 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 PKN1Q16512 942 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 NECAB2Q7Z6G3 386 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 CCNJLQ8IV13 435 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 C10orf53Q8N6V4 93 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 FICDQ9BVA6 458 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 DISP1Q96F81 1524 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms