RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ZNF333Q96JL9 665 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 RSL24D1Q9UHA3 163 aaKnown RBP20.22■□□□□ 0.83
SHANK1-203ENST00000391813 DMTF1Q9Y222 760 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 TOMM70O94826 608 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 PTPN7P35236 360 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 ARMC4Q5T2S8 1044 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 BTBD8Q5XKL5 378 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 ARHGEF19Q8IW93 802 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 RORBQ92753 470 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 MTERF3Q96E29 417 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 KCNH7Q9NS40 1196 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 PRMT7Q9NVM4 692 aaPredicted RBP20.21■□□□□ 0.83
SHANK1-203ENST00000391813 SESN1Q9Y6P5 492 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 PRKCEQ02156 737 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 GCNT1Q02742 428 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 TRAF2Q12933 501 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 NAB1Q13506 487 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 RBM44Q6ZP01 1051 aaKnown RBP20.21■□□□□ 0.83
SHANK1-203ENST00000391813 KATNAL2Q8IYT4 538 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 VPS37AQ8NEZ2 397 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 DIS3LQ8TF46 1054 aaKnown RBP20.21■□□□□ 0.83
SHANK1-203ENST00000391813 ZNF862O60290 1169 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 DSG3P32926 999 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 MRPS22P82650 360 aaKnown RBP20.21■□□□□ 0.83
SHANK1-203ENST00000391813 LIN52Q52LA3 116 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 PTF1AQ7RTS3 328 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 NANOGNBQ7Z5D8 188 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 PHACTR1Q9C0D0 580 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 NEUROG2Q9H2A3 272 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 SMNDC1O75940 238 aaKnown RBP eCLIP20.21■□□□□ 0.83
SHANK1-203ENST00000391813 MFN2O95140 757 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 C2CD6Q53TS8 623 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 PLA2G4FQ68DD2 849 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 OMA1Q96E52 524 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 SPATC1LQ9H0A9 340 aa20.21■□□□□ 0.83
SHANK1-203ENST00000391813 GAKO14976 1311 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 KLRC4O43908 158 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 GSCP56915 257 aaPredicted RBP20.2■□□□□ 0.82
SHANK1-203ENST00000391813 LRRC55Q6ZSA7 311 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 SZRD1Q7Z422 152 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 SH3GLB1Q9Y371 365 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 SIGLEC1Q9BZZ2 1709 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 PDZK1P1A8MUH7 402 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 CNOT3O75175 753 aaKnown RBP20.2■□□□□ 0.82
SHANK1-203ENST00000391813 DDHD2O94830 711 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 SP100P23497 879 aaPredicted RBP20.2■□□□□ 0.82
SHANK1-203ENST00000391813 VEPH1Q14D04 833 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 FAM9CQ8IZT9 166 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 FBXW8Q8N3Y1 598 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.2■□□□□ 0.82
SHANK1-203ENST00000391813 DNERQ8NFT8 737 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 VPS9D1Q9Y2B5 631 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 TP53BP2Q13625 1128 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 KIZQ2M2Z5 673 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 TMEM63BQ5T3F8 832 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 SV2AQ7L0J3 742 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 IPMKQ8NFU5 416 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 SH3TC2Q8TF17 1288 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 SOCS4Q8WXH5 440 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 SLC25A23Q9BV35 468 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 NOL6Q9H6R4 1146 aaKnown RBP20.2■□□□□ 0.82
SHANK1-203ENST00000391813 RIOX1Q9H6W3 641 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 CD274Q9NZQ7 290 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 KNDC1Q76NI1 1749 aa20.2■□□□□ 0.82
SHANK1-203ENST00000391813 DPPA5A6NC42 116 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 PDHXO00330 501 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 EFCAB14O75071 495 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 MOCS2O96007 188 aaPredicted RBP20.19■□□□□ 0.82
SHANK1-203ENST00000391813 SLC26A2P50443 739 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 ARCQ7LC44 396 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 TMEM109Q9BVC6 243 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 USP18Q9UMW8 372 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 ADCY6O43306 1168 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 UQCRBP14927 111 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 SHMT1P34896 483 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 RGS4P49798 205 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 ITGADQ13349 1161 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 FAM98BQ52LJ0 330 aaKnown RBP20.19■□□□□ 0.82
SHANK1-203ENST00000391813 GLRA4Q5JXX5 417 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 DENND5BQ6ZUT9 1274 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 GALNT15Q8N3T1 639 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 SETD9Q8NE22 299 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 NSMCE2Q96MF7 247 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 DDX50Q9BQ39 737 aaKnown RBP20.19■□□□□ 0.82
SHANK1-203ENST00000391813 DNPEPQ9ULA0 475 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 PAEPP09466 180 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 HIST1H2AGP0C0S8 130 aaPredicted RBP20.19■□□□□ 0.82
SHANK1-203ENST00000391813 HIST1H2ADP20671 130 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 EPS8Q12929 822 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 CHADLQ6NUI6 762 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 SLC22A9Q8IVM8 553 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 SCN4BQ8IWT1 228 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 VGLL2Q8N8G2 317 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 MAB21L3Q8N8X9 362 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 HIST1H2AHQ96KK5 128 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 HIST1H2AJQ99878 128 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 H2AFJQ9BTM1 129 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 TARS2Q9BW92 718 aaKnown RBP20.19■□□□□ 0.82
SHANK1-203ENST00000391813 RPS6KA3P51812 740 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 ACVR2BQ13705 512 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms