RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 GZF1Q9H116 711 aaPredicted RBP8.16□□□□□ -1.1
TRAV6-201ENST00000390428 XYLT2Q9H1B5 865 aa8.16□□□□□ -1.1
TRAV6-201ENST00000390428 ZDHHC4Q9NPG8 344 aa8.16□□□□□ -1.1
TRAV6-201ENST00000390428 ARHGEF4Q9NR80 690 aa8.16□□□□□ -1.1
TRAV6-201ENST00000390428 CHORDC1Q9UHD1 332 aaPredicted RBP8.16□□□□□ -1.1
TRAV6-201ENST00000390428 WASF3Q9UPY6 502 aa8.16□□□□□ -1.1
TRAV6-201ENST00000390428 PCDH15Q96QU1 1955 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 TNFRSF10BO14763 440 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 SPTLC2O15270 562 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 HOXC11O43248 304 aaPredicted RBP8.15□□□□□ -1.1
TRAV6-201ENST00000390428 STX6O43752 255 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 PPP6R2O75170 966 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 ITGB2P05107 769 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 PTGER3P43115 390 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 TUBP50607 506 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 KDSRQ06136 332 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 LMAN2Q12907 356 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 BYSLQ13895 437 aaKnown RBP8.15□□□□□ -1.1
TRAV6-201ENST00000390428 UAP1L1Q3KQV9 507 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 TRIM61Q5EBN2 209 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 SPDYCQ5MJ68 293 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 HECTD3Q5T447 861 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 SNX30Q5VWJ9 437 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 UNQ6494/PRO21346Q6UXR6 183 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 PAQR9Q6ZVX9 377 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 UNC13DQ70J99 1090 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 ARMCX6Q7L4S7 300 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 FAM35AQ86V20 835 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 SYT12Q8IV01 421 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 NELFCDQ8IXH7 590 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 C12orf56Q8IXR9 622 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 TMEFF1Q8IYR6 380 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 IQUBQ8NA54 791 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 SCAMP5Q8TAC9 235 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 HMGB4Q8WW32 186 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 FBXO32Q969P5 355 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 DHX58Q96C10 678 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 KCNK16Q96T55 309 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 DUSP9Q99956 384 aaKnown RBP8.15□□□□□ -1.1
TRAV6-201ENST00000390428 NUSAP1Q9BXS6 441 aaKnown RBP8.15□□□□□ -1.1
TRAV6-201ENST00000390428 TMEM74BQ9NUR3 256 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 IL37Q9NZH6 218 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 BCCIPQ9P287 314 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRAV6-201ENST00000390428 MBD1Q9UIS9 605 aaPredicted RBP8.15□□□□□ -1.1
TRAV6-201ENST00000390428 SH3BP1Q9Y3L3 701 aa8.15□□□□□ -1.1
TRAV6-201ENST00000390428 ATP8B3O60423 1300 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 TCRBV21S2A2A0A5A6 115 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 FAM92AA1XBS5 289 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 TBC1D3BA6NDS4 549 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 CUTAO60888 179 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 PHACTR2O75167 634 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 SIN3BO75182 1162 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 TULP3O75386 442 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 TOP3BO95985 862 aaKnown RBP8.14□□□□□ -1.11
TRAV6-201ENST00000390428 ZDHHC11BP0C7U3 371 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 SPINK2P20155 84 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 COL8A1P27658 744 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 DPP6P42658 865 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 SLC5A3P53794 718 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 CDH8P55286 799 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 HIF1AQ16665 826 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 BMT2Q1RMZ1 405 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 ZNF699Q32M78 642 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 PREPLQ4J6C6 727 aaPredicted RBP8.14□□□□□ -1.11
TRAV6-201ENST00000390428 PEAR1Q5VY43 1037 aaPredicted RBP8.14□□□□□ -1.11
TRAV6-201ENST00000390428 LYSMD4Q5XG99 296 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 BTBD8Q5XKL5 378 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 SLC23A3Q6PIS1 610 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 SHC4Q6S5L8 630 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 TRMT11Q7Z4G4 463 aaKnown RBP8.14□□□□□ -1.11
TRAV6-201ENST00000390428 BTLAQ7Z6A9 289 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 BBS7Q8IWZ6 715 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 ZNF513Q8N8E2 541 aaPredicted RBP8.14□□□□□ -1.11
TRAV6-201ENST00000390428 NAT16Q8N8M0 369 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 DEFB124Q8NES8 71 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 PLEKHO2Q8TD55 490 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 WBP2Q969T9 261 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 SMARCD1Q96GM5 515 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 TNIP3Q96KP6 325 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 ZNF396Q96N95 335 aaPredicted RBP8.14□□□□□ -1.11
TRAV6-201ENST00000390428 MED10Q9BTT4 135 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 SCNM1Q9BWG6 230 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 BLZF1Q9H2G9 400 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 SUV39H2Q9H5I1 410 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 SMYD3Q9H7B4 428 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 CCSER2Q9H7U1 834 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 MAGEF1Q9HAY2 307 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 DMAP1Q9NPF5 467 aaPredicted RBP8.14□□□□□ -1.11
TRAV6-201ENST00000390428 SPHK2Q9NRA0 654 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 COMMD8Q9NX08 183 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 GMIPQ9P107 970 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 CGNQ9P2M7 1197 aaKnown RBP8.14□□□□□ -1.11
TRAV6-201ENST00000390428 PILRBQ9UKJ0 227 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 ZMIZ1Q9ULJ6 1067 aa8.14□□□□□ -1.11
TRAV6-201ENST00000390428 NOVA2Q9UNW9 492 aaKnown RBP8.14□□□□□ -1.11
TRAV6-201ENST00000390428 FAM208BQ5VWN6 2430 aa8.13□□□□□ -1.11
TRAV6-201ENST00000390428 CACNA1GO43497 2377 aa8.13□□□□□ -1.11
TRAV6-201ENST00000390428 ATXN2Q99700 1313 aaKnown RBP8.13□□□□□ -1.11
TRAV6-201ENST00000390428 LAMA1P25391 3075 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms