RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 MDH1P40925 334 aaKnown RBP10.57□□□□□ -0.72
PKP4-201ENST00000389757 SERPINB4P48594 390 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 SH3BGRP55822 239 aaPredicted RBP10.57□□□□□ -0.72
PKP4-201ENST00000389757 PRKCZQ05513 592 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 IL17AQ16552 155 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 LVRNQ6Q4G3 990 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 SH2D3CQ8N5H7 860 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 E2F7Q96AV8 911 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 DERAQ9Y315 318 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 LTN1O94822 1766 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 MAGEB16A2A368 324 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 KPNA3O00505 521 aaPredicted RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 GLRA3O75311 464 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 PPP1R37O75864 691 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 BCL2L1Q07817 233 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 KRT72Q14CN4 511 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 PIGZQ86VD9 579 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 NUP93Q8N1F7 819 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 KAT5Q92993 513 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 SERPINB12Q96P63 405 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 C2orf49Q9BVC5 232 aaPredicted RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 ZCCHC2Q9C0B9 1178 aaKnown RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 NPHS2Q9NP85 383 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 SEPT3Q9UH03 358 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 ARL2BPQ9Y2Y0 163 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 LMO7Q8WWI1 1683 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 MOXD2PA6NHM9 499 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 TREHO43280 583 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 KLRC4O43908 158 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 FGBP02675 491 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 CYP2A6P11509 494 aaPredicted RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 NDUFV1P49821 464 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 LLGL2Q6P1M3 1020 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 NLRP9Q7RTR0 991 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 NT5DC3Q86UY8 548 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 ANKRD52Q8NB46 1076 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 DACT3Q96B18 629 aaPredicted RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 CCDC126Q96EE4 140 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 SPACA6W5XKT8 324 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 F8VP50 259 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 IFRD1O00458 451 aaPredicted RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 RARGP13631 454 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 SMPD1P17405 629 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 MSH3P20585 1137 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 CHKAP35790 457 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 PPIGQ13427 754 aaKnown RBP eCLIP10.56□□□□□ -0.722e-7■■□□□ 13.1
PKP4-201ENST00000389757 PLCL1Q15111 1095 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 RASIP1Q5U651 963 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 PAPD7Q5XG87 772 aaKnown RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 C11orf96Q7Z7L8 435 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 TOP6BLQ8N6T0 577 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 OR5B17Q8NGF7 314 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 PIP4K2CQ8TBX8 421 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 CASKIN2Q8WXE0 1202 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 TTPALQ9BTX7 342 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 MRPL1Q9BYD6 325 aaKnown RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 PABPC3Q9H361 631 aaKnown RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 YY1AP1Q9H869 796 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 PCDHA2Q9Y5H9 948 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 LTBP3Q9NS15 1303 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 HACD1B0YJ81 288 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 FGF10O15520 208 aaPredicted RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 SUPT7LO94864 414 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 GNRH1P01148 92 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 POLR2LP62875 67 aaKnown RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 CRHR2Q13324 411 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 ZACNQ401N2 412 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 HYIQ5T013 277 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 TMCO4Q5TGY1 634 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 ARMC2Q8NEN0 867 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 EPS8L1Q8TE68 723 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 CEP41Q9BYV8 373 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 SPASTQ9UBP0 616 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 PLIN4Q96Q06 1357 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 SOWAHBA6NEL2 793 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 NT5C1B-RDH14C9J2C7 533 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 O00370 1275 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 GLUD1P00367 558 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 DDX39BQ13838 428 aaKnown RBP10.56□□□□□ -0.72
PKP4-201ENST00000389757 NYAP1Q6ZVC0 841 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 PCYOX1LQ8NBM8 494 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 NRBF2Q96F24 287 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 VAT1Q99536 393 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 PRDM16Q9HAZ2 1276 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 DCDC2Q9UHG0 476 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 PADI3Q9ULW8 664 aa10.56□□□□□ -0.72
PKP4-201ENST00000389757 EPB42P16452 691 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 IL10P22301 178 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 GRK3P35626 688 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 ATXN3P54252 364 aaPredicted RBP10.55□□□□□ -0.72
PKP4-201ENST00000389757 POU6F1Q14863 301 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 CHI3L2Q15782 390 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 BMT2Q1RMZ1 405 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 RGS9BPQ6ZS82 235 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 LRRC55Q6ZSA7 311 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 PTAR1Q7Z6K3 402 aaPredicted RBP10.55□□□□□ -0.72
PKP4-201ENST00000389757 STRA8Q7Z7C7 330 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 TAGAPQ8N103 731 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 PRKD2Q9BZL6 878 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms