RNA–Protein interactions for RNA: ENST00000381756.9

GGA1-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 1 (best) BASIC

Gene GGA1, Length 2,107 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-204	ENST00000381756	INSC	Q1MX18	579 aa		27.56	■■■□□ 2
GGA1-204	ENST00000381756	FAXC	Q5TGI0	409 aa		27.56	■■■□□ 2
GGA1-204	ENST00000381756	MROH9	Q5TGP6	573 aa		27.56	■■■□□ 2
GGA1-204	ENST00000381756	GPAT2	Q6NUI2	795 aa		27.56	■■■□□ 2
GGA1-204	ENST00000381756	IYD	Q6PHW0	289 aa		27.56	■■■□□ 2
GGA1-204	ENST00000381756	TAS1R3	Q7RTX0	852 aa		27.56	■■■□□ 2
GGA1-204	ENST00000381756	WDTC1	Q8N5D0	677 aa		27.56	■■■□□ 2
GGA1-204	ENST00000381756	ENDOD1	O94919	500 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	POR	P16435	677 aa	Predicted RBP	27.55	■■■□□ 2
GGA1-204	ENST00000381756	CACNB3	P54284	484 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	NLRP11	P59045	1033 aa	Known RBP	27.55	■■■□□ 2
GGA1-204	ENST00000381756	POTEH	Q6S545	545 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	SDCBP2	Q9H190	292 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	TCEAL9	Q9UHQ7	104 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	HERC5	Q9UII4	1024 aa	Known RBP	27.55	■■■□□ 2
GGA1-204	ENST00000381756	EMCN	Q9ULC0	261 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	UGT1A9	O60656	530 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	NCF2	P19878	526 aa	Predicted RBP	27.55	■■■□□ 2
GGA1-204	ENST00000381756	NUMB	P49757	651 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	WNT7B	P56706	349 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	PLOD1	Q02809	727 aa	Predicted RBP	27.55	■■■□□ 2
GGA1-204	ENST00000381756	KLF10	Q13118	480 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	SLFN12L	Q6IEE8	588 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	ANKRD23	Q86SG2	305 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	PATL1	Q86TB9	770 aa	Known RBP	27.55	■■■□□ 2
GGA1-204	ENST00000381756	VPS50	Q96JG6	964 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	TRIM56	Q9BRZ2	755 aa	Known RBP	27.55	■■■□□ 2
GGA1-204	ENST00000381756	UGT1A7	Q9HAW7	530 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	UGT1A10	Q9HAW8	530 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	UGT1A8	Q9HAW9	530 aa		27.55	■■■□□ 2
GGA1-204	ENST00000381756	RBAK	Q9NYW8	714 aa	Predicted RBP	27.55	■■■□□ 2
GGA1-204	ENST00000381756	COL2A1	P02458	1487 aa	Predicted RBP	27.55	■■■□□ 2
GGA1-204	ENST00000381756	GPR25	O00155	361 aa		27.54	■■■□□ 2
GGA1-204	ENST00000381756	WDR46	O15213	610 aa	Known RBP	27.54	■■■□□ 2
GGA1-204	ENST00000381756	THRA	P10827	490 aa		27.54	■■■□□ 2
GGA1-204	ENST00000381756	AP3M2	P53677	418 aa		27.54	■■■□□ 2
GGA1-204	ENST00000381756	RPL10A	P62906	217 aa	Known RBP	27.54	■■■□□ 2
GGA1-204	ENST00000381756	TUBA4A	P68366	448 aa		27.54	■■■□□ 2
GGA1-204	ENST00000381756	VPS72	Q15906	364 aa		27.54	■■■□□ 2
GGA1-204	ENST00000381756	KBTBD7	Q8WVZ9	684 aa		27.54	■■■□□ 2
GGA1-204	ENST00000381756	GCOM2	Q9BZD3	368 aa	Predicted RBP	27.54	■■■□□ 2
GGA1-204	ENST00000381756	PCDHGB4	Q9UN71	923 aa		27.54	■■■□□ 2
GGA1-204	ENST00000381756	PCDHGB5	Q9Y5G0	923 aa		27.54	■■■□□ 2
GGA1-204	ENST00000381756	CDY2A	Q9Y6F7	541 aa		27.54	■■■□□ 2
GGA1-204	ENST00000381756	CDY1	Q9Y6F8	540 aa		27.54	■■■□□ 2
GGA1-204	ENST00000381756	LOC100653049	A0A140TA62	436 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	SLC22A2	O15244	555 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	DKC1	O60832	514 aa	Known RBP eCLIP	27.53	■■■□□ 2
GGA1-204	ENST00000381756	KRT34	O76011	436 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	ZFX	P17010	805 aa	Predicted RBP	27.53	■■■□□ 2
GGA1-204	ENST00000381756	PSMC3	P17980	439 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	ALDH1B1	P30837	517 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	FLOT2	Q14254	428 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	PCLAF	Q15004	111 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	TSPAN14	Q8NG11	270 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	EBNA1BP2	Q99848	306 aa	Known RBP	27.53	■■■□□ 2
GGA1-204	ENST00000381756	CCNL1	Q9UK58	526 aa	Predicted RBP	27.53	■■■□□ 2
GGA1-204	ENST00000381756	PCDHA11	Q9Y5I1	949 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	PRSS51	A0A1B0GVH4	220 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	DGAT1	O75907	488 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	PIGR	P01833	764 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	MAGEA10	P43363	369 aa	Predicted RBP	27.53	■■■□□ 2
GGA1-204	ENST00000381756	ABCE1	P61221	599 aa	Known RBP	27.53	■■■□□ 2
GGA1-204	ENST00000381756	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	27.53	■■■□□ 2
GGA1-204	ENST00000381756	SLC4A11	Q8NBS3	891 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	IL31RA	Q8NI17	732 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	NLRP7	Q8WX94	980 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	PDLIM7	Q9NR12	457 aa		27.53	■■■□□ 2
GGA1-204	ENST00000381756	KANSL1L	A0AUZ9	987 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	ASS1	P00966	412 aa	Known RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	TXNL4A	P83876	142 aa	Known RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	CYP4A22	Q5TCH4	519 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	PHTF2	Q8N3S3	785 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	DEPDC1B	Q8WUY9	529 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	SLC7A3	Q8WY07	619 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	HSPBAP1	Q96EW2	488 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	CNDP1	Q96KN2	507 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	MMP19	Q99542	508 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	OSBPL6	Q9BZF3	934 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	PNPO	Q9NVS9	261 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	TUBGCP4	Q9UGJ1	667 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	SPDYE16	A6NNV3	312 aa	Predicted RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	ZNF701	M0R085	212 aa	Predicted RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	PPEF1	O14829	653 aa	Predicted RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	DCX	O43602	365 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	ENTPD3	O75355	529 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	VARS	P26640	1264 aa	Known RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	YWHAE	P62258	255 aa	Known RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	FKBP1A	P62942	108 aa	Known RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	MRPS9	P82933	396 aa	Known RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	PDAP1	Q13442	181 aa	Known RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	EPGN	Q6UW88	154 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	SETD3	Q86TU7	594 aa	Predicted RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	RSPH3	Q86UC2	560 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	MCF2L2	Q86YR7	1114 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	CHERP	Q8IWX8	916 aa	Known RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	KIAA0319L	Q8IZA0	1049 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	ZNF513	Q8N8E2	541 aa	Predicted RBP	27.52	■■■□□ 2
GGA1-204	ENST00000381756	KY	Q8NBH2	561 aa		27.52	■■■□□ 2
GGA1-204	ENST00000381756	CEP170P1	Q96L14	293 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms