RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 NAXDQ8IW45 347 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 ARHGAP18Q8N392 663 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 DDI1Q8WTU0 396 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 PRCCQ92733 491 aaPredicted RBP24.23■■□□□ 1.47
U2AF1-202ENST00000380276 SIPA1Q96FS4 1042 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 SPATA32Q96LK8 384 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 TMEM8AQ9HCN3 771 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 THAP10Q9P2Z0 257 aaPredicted RBP24.23■■□□□ 1.47
U2AF1-202ENST00000380276 FBXO10Q9UK96 956 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 AGO1Q9UL18 857 aaKnown RBP24.23■■□□□ 1.47
U2AF1-202ENST00000380276 SLC27A6Q9Y2P4 619 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 USP3Q9Y6I4 520 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 CMA1P23946 247 aa24.22■■□□□ 1.47
U2AF1-202ENST00000380276 SLC14A1Q13336 389 aa24.22■■□□□ 1.47
U2AF1-202ENST00000380276 ADAM9Q13443 819 aa24.22■■□□□ 1.47
U2AF1-202ENST00000380276 TMPRSS6Q8IU80 811 aa24.22■■□□□ 1.47
U2AF1-202ENST00000380276 MKRN2Q9H000 416 aaKnown RBP24.22■■□□□ 1.47
U2AF1-202ENST00000380276 WSB2Q9NYS7 404 aaPredicted RBP24.22■■□□□ 1.47
U2AF1-202ENST00000380276 MARCH2Q9P0N8 246 aa24.22■■□□□ 1.47
U2AF1-202ENST00000380276 A0A1B0GTW7 788 aa24.21■■□□□ 1.47
U2AF1-202ENST00000380276 NPC1O15118 1278 aa24.21■■□□□ 1.47
U2AF1-202ENST00000380276 SLC8A3P57103 927 aa24.21■■□□□ 1.47
U2AF1-202ENST00000380276 YWHAGP61981 247 aaKnown RBP eCLIP24.21■■□□□ 1.47
U2AF1-202ENST00000380276 ZNF234Q14588 700 aa24.21■■□□□ 1.47
U2AF1-202ENST00000380276 DCAF12L1Q5VU92 463 aa24.21■■□□□ 1.47
U2AF1-202ENST00000380276 KRT39Q6A163 491 aa24.21■■□□□ 1.47
U2AF1-202ENST00000380276 FAM124AQ86V42 546 aa24.21■■□□□ 1.47
U2AF1-202ENST00000380276 PNPLA1Q8N8W4 532 aa24.21■■□□□ 1.47
U2AF1-202ENST00000380276 SORCS1Q8WY21 1168 aa24.21■■□□□ 1.47
U2AF1-202ENST00000380276 ITM2CQ9NQX7 267 aa24.21■■□□□ 1.47
U2AF1-202ENST00000380276 ELOVL2Q9NXB9 296 aa24.21■■□□□ 1.47
U2AF1-202ENST00000380276 USP36Q9P275 1121 aaKnown RBP24.21■■□□□ 1.47
U2AF1-202ENST00000380276 RHOBTB3O94955 611 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 EPHX1P07099 455 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 ZNF132P52740 706 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 E2F5Q15329 346 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 SERPINA13PQ6UXR4 307 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 PIGZQ86VD9 579 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 ZNF276Q8N554 614 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 SETD7Q8WTS6 366 aaKnown RBP24.2■■□□□ 1.46
U2AF1-202ENST00000380276 SNX19Q92543 992 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 TMEM176AQ96HP8 235 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 ZDHHC5Q9C0B5 715 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 CISHQ9NSE2 258 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 LHX6Q9UPM6 363 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 CHD6Q8TD26 2715 aa24.2■■□□□ 1.46
U2AF1-202ENST00000380276 PCNX2A6NKB5 2137 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 KCNJ18B7U540 433 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 TSPAN3O60637 253 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 FTH1P19P0C7X4 201 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 PRKCHP24723 683 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 OXTRP30559 389 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 MXI1P50539 228 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 TPMTP51580 245 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 TKTL1P51854 596 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 NDUFA8P51970 172 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 NFIL3Q16649 462 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 RAB44Q7Z6P3 723 aaPredicted RBP24.19■■□□□ 1.46
U2AF1-202ENST00000380276 METTL3Q86U44 580 aaKnown RBP24.19■■□□□ 1.46
U2AF1-202ENST00000380276 SEMA4DQ92854 862 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 EEF2KMTQ96G04 330 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 ARID3AQ99856 593 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 CLEC4EQ9ULY5 219 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 HPSEQ9Y251 543 aa24.19■■□□□ 1.46
U2AF1-202ENST00000380276 GJB3O75712 270 aa24.18■■□□□ 1.46
U2AF1-202ENST00000380276 EIF4HQ15056 248 aaKnown RBP24.18■■□□□ 1.46
U2AF1-202ENST00000380276 GOLGA7BQ2TAP0 167 aa24.18■■□□□ 1.46
U2AF1-202ENST00000380276 GUF1Q8N442 669 aaKnown RBP24.18■■□□□ 1.46
U2AF1-202ENST00000380276 TTC39CQ8N584 583 aa24.18■■□□□ 1.46
U2AF1-202ENST00000380276 SLC4A11Q8NBS3 891 aa24.18■■□□□ 1.46
U2AF1-202ENST00000380276 CADM4Q8NFZ8 388 aa24.18■■□□□ 1.46
U2AF1-202ENST00000380276 NDRG1Q92597 394 aaKnown RBP24.18■■□□□ 1.46
U2AF1-202ENST00000380276 PIWIL1Q96J94 861 aaKnown RBP24.18■■□□□ 1.46
U2AF1-202ENST00000380276 ULBP1Q9BZM6 244 aa24.18■■□□□ 1.46
U2AF1-202ENST00000380276 RAB20Q9NX57 234 aa24.18■■□□□ 1.46
U2AF1-202ENST00000380276 IGF2RP11717 2491 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 GTF2H1P32780 548 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 RAD23BP54727 409 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 KRT85P78386 507 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 RING1Q06587 406 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 DPYDQ12882 1025 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 FNDC3BQ53EP0 1204 aaKnown RBP24.17■■□□□ 1.46
U2AF1-202ENST00000380276 CPXM2Q8N436 756 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 FBXL13Q8NEE6 735 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 RNF139Q8WU17 664 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 DNASE2BQ8WZ79 361 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 PLD4Q96BZ4 506 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 NUP58Q9BVL2 599 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 GAREM1Q9H706 876 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 IL21RQ9HBE5 538 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 LRRC4Q9HBW1 653 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 EIF2B4Q9UI10 523 aaKnown RBP24.17■■□□□ 1.46
U2AF1-202ENST00000380276 APOBEC2Q9Y235 224 aaKnown RBP24.17■■□□□ 1.46
U2AF1-202ENST00000380276 CACNA1EQ15878 2313 aa24.17■■□□□ 1.46
U2AF1-202ENST00000380276 ASPMQ8IZT6 3477 aa24.16■■□□□ 1.46
U2AF1-202ENST00000380276 BCAT2O15382 392 aaPredicted RBP24.16■■□□□ 1.46
U2AF1-202ENST00000380276 STX10O60499 249 aa24.16■■□□□ 1.46
U2AF1-202ENST00000380276 CER1O95813 267 aa24.16■■□□□ 1.46
U2AF1-202ENST00000380276 ZBED1O96006 694 aa24.16■■□□□ 1.46
U2AF1-202ENST00000380276 EPB41P11171 864 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms