RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 DAB1O75553 588 aa22.31■■□□□ 1.16
TRIM54-202ENST00000380075 GSTA2P09210 222 aa22.31■■□□□ 1.16
TRIM54-202ENST00000380075 CKBP12277 381 aa22.31■■□□□ 1.16
TRIM54-202ENST00000380075 PDK4Q16654 411 aa22.31■■□□□ 1.16
TRIM54-202ENST00000380075 SLC45A4Q5BKX6 768 aa22.31■■□□□ 1.16
TRIM54-202ENST00000380075 HACE1Q8IYU2 909 aa22.31■■□□□ 1.16
TRIM54-202ENST00000380075 CLEC4CQ8WTT0 213 aa22.31■■□□□ 1.16
TRIM54-202ENST00000380075 DCAKDQ8WVC6 231 aa22.31■■□□□ 1.16
TRIM54-202ENST00000380075 KCTD13Q8WZ19 329 aa22.31■■□□□ 1.16
TRIM54-202ENST00000380075 ETNK2Q9NVF9 386 aa22.31■■□□□ 1.16
TRIM54-202ENST00000380075 PRKAG3Q9UGI9 489 aa22.31■■□□□ 1.16
TRIM54-202ENST00000380075 IQANK1A0A1B0GTG1 560 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 KIAA0355O15063 1070 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 GCATO75600 419 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 CTSHP09668 335 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 SYN1P17600 705 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 CYP2C18P33260 490 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 ADCY1Q08828 1119 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 SLC25A52Q3SY17 297 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 ZNF618Q5T7W0 954 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 FAM228AQ86W67 206 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 TAB3Q8N5C8 712 aaPredicted RBP22.3■■□□□ 1.16
TRIM54-202ENST00000380075 PPP1R10Q96QC0 940 aaKnown RBP22.3■■□□□ 1.16
TRIM54-202ENST00000380075 PITPNM3Q9BZ71 974 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 GOLGA2P5Q9HBQ8 144 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 HACD1B0YJ81 288 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 TM9SF1O15321 606 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 TFE3P19532 575 aaPredicted RBP22.3■■□□□ 1.16
TRIM54-202ENST00000380075 BFSP2Q13515 415 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 SPRED3Q2MJR0 410 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 RPAINQ86UA6 219 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 PIGZQ86VD9 579 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 C4orf33Q8N1A6 199 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 MZB1Q8WU39 189 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 QKIQ96PU8 341 aaKnown RBP eCLIP22.3■■□□□ 1.16
TRIM54-202ENST00000380075 CSPG4P5Q96PW8 444 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 RNF19AQ9NV58 838 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 HAUS2Q9NVX0 235 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 MTMR10Q9NXD2 777 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 STARD13Q9Y3M8 1113 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 IKBKGQ9Y6K9 419 aa22.3■■□□□ 1.16
TRIM54-202ENST00000380075 TNRC18O15417 2968 aaPredicted RBP22.3■■□□□ 1.16
TRIM54-202ENST00000380075 GABRDO14764 452 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 NPR3P17342 541 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 KRT4P19013 534 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 FOXN2P32314 431 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 RPA3P35244 121 aaPredicted RBP22.29■■□□□ 1.16
TRIM54-202ENST00000380075 ARL4AP40617 200 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 NRLP54845 237 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 MRPS6P82932 125 aaKnown RBP22.29■■□□□ 1.16
TRIM54-202ENST00000380075 RNF43Q68DV7 783 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 RSPH3Q86UC2 560 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 OSTM1Q86WC4 334 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 VPS52Q8N1B4 723 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 SLC44A1Q8WWI5 657 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 KCTD15Q96SI1 283 aaPredicted RBP22.29■■□□□ 1.16
TRIM54-202ENST00000380075 PAIP2Q9BPZ3 127 aaKnown RBP22.29■■□□□ 1.16
TRIM54-202ENST00000380075 KIF9Q9HAQ2 790 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 KLHL14Q9P2G3 628 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 A0A1W2PPM1 405 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 TCRBV9S1A1TA0A576 114 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 PITPNM1O00562 1244 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 CYB561D2O14569 222 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 PTGESO14684 152 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 TRDMT1O14717 391 aaKnown RBP22.29■■□□□ 1.16
TRIM54-202ENST00000380075 ZNF189O75820 626 aaPredicted RBP22.29■■□□□ 1.16
TRIM54-202ENST00000380075 RPLP2P05387 115 aaKnown RBP22.29■■□□□ 1.16
TRIM54-202ENST00000380075 TPSB2P20231 275 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 TKTP29401 623 aaKnown RBP22.29■■□□□ 1.16
TRIM54-202ENST00000380075 CCL23P55773 120 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 YWHAZP63104 245 aaKnown RBP22.29■■□□□ 1.16
TRIM54-202ENST00000380075 EFTUD2Q15029 972 aaKnown RBP eCLIP22.29■■□□□ 1.16
TRIM54-202ENST00000380075 TPSAB1Q15661 275 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 ZKSCAN8Q15776 578 aaPredicted RBP22.29■■□□□ 1.16
TRIM54-202ENST00000380075 HHATQ5VTY9 493 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 FBXW10Q5XX13 1052 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 TRAF7Q6Q0C0 670 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 FUKQ8N0W3 1084 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 PRKAG2Q9UGJ0 569 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 TRPV2Q9Y5S1 764 aa22.29■■□□□ 1.16
TRIM54-202ENST00000380075 RASSF9O75901 435 aa22.28■■□□□ 1.16
TRIM54-202ENST00000380075 TIMP1P01033 207 aa22.28■■□□□ 1.16
TRIM54-202ENST00000380075 CHRNA1P02708 482 aa22.28■■□□□ 1.16
TRIM54-202ENST00000380075 RAG1P15918 1043 aa22.28■■□□□ 1.16
TRIM54-202ENST00000380075 PTPN1P18031 435 aaKnown RBP22.28■■□□□ 1.16
TRIM54-202ENST00000380075 NOS2P35228 1153 aa22.28■■□□□ 1.16
TRIM54-202ENST00000380075 MRPS5P82675 430 aaKnown RBP22.28■■□□□ 1.16
TRIM54-202ENST00000380075 TMEM86AQ8N2M4 240 aa22.28■■□□□ 1.16
TRIM54-202ENST00000380075 LRRC8CQ8TDW0 803 aa22.28■■□□□ 1.16
TRIM54-202ENST00000380075 MRRFQ96E11 262 aaKnown RBP22.28■■□□□ 1.16
TRIM54-202ENST00000380075 CHST12Q9NRB3 414 aa22.28■■□□□ 1.16
TRIM54-202ENST00000380075 FZD10Q9ULW2 581 aa22.28■■□□□ 1.16
TRIM54-202ENST00000380075 STAP1Q9ULZ2 295 aa22.28■■□□□ 1.16
TRIM54-202ENST00000380075 INHBAP08476 426 aa22.27■■□□□ 1.16
TRIM54-202ENST00000380075 SELPP16109 830 aa22.27■■□□□ 1.16
TRIM54-202ENST00000380075 SULT1E1P49888 294 aa22.27■■□□□ 1.16
TRIM54-202ENST00000380075 YWHAGP61981 247 aaKnown RBP eCLIP22.27■■□□□ 1.16
TRIM54-202ENST00000380075 ADIGQ0VDE8 80 aa22.27■■□□□ 1.16
TRIM54-202ENST00000380075 IGDCC3Q8IVU1 814 aa22.27■■□□□ 1.16
TRIM54-202ENST00000380075 DEFB106AQ8N104 65 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms