RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ADPRHL2Q9NX46 363 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 STAP2Q9UGK3 403 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 OR10H1Q9Y4A9 318 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 KIF1CO43896 1103 aaKnown RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 KLRC2P26717 231 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 CDC40O60508 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 SOX11P35716 441 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 SMCO1Q147U7 214 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 TERF2Q15554 542 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 QRICH1Q2TAL8 776 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 AFF2P51816 1311 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 SPTLC1O15269 473 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 PLA2G6O60733 806 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 PNMA5Q96PV4 448 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 DDIT4Q9NX09 232 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 BCLAF3A2AJT9 711 aaKnown RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 PDIA5Q14554 519 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 GPR101Q96P66 508 aaPredicted RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 MGAT4AQ9UM21 535 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 UBQLN1Q9UMX0 589 aaKnown RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 SUPT7LO94864 414 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 PUDPQ08623 228 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 CYP2A13Q16696 494 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 LDHDQ86WU2 507 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 TRIM64A6NGJ6 449 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 EIF2S3P41091 472 aaKnown RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 MARSP56192 900 aaKnown RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 EFEMP1Q12805 493 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 SCARF1Q14162 830 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 PDK2Q15119 407 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 NR6A1Q15406 480 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 RWDD3Q9Y3V2 267 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 PNMA8CA0A1B0GUJ8 204 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 PDXKO00764 312 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 NCAM2O15394 837 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 TPP2P29144 1249 aaPredicted RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 TRIP10Q15642 601 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 SPANXN2Q5MJ10 180 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 CBWD2Q8IUF1 395 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 ROPN1BQ9BZX4 212 aaPredicted RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 ROPN1Q9HAT0 212 aaPredicted RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 PCDHB2Q9Y5E7 798 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 B3GAT3O94766 335 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 ATP5BP06576 529 aaKnown RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 HUNKP57058 714 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 DMTNQ08495 405 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 CCNIQ14094 377 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 SRP68Q9UHB9 627 aaKnown RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 PZPP20742 1482 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 AP1G2O75843 785 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 TPBGLP0DKB5 382 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 DNAJC9Q8WXX5 260 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 SLC9A6Q92581 669 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 NPHP4O75161 1426 aaPredicted RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 CCL15-CCL14A0A0B4J2E2 113 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 CCL15Q16663 113 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 CKLFQ9UBR5 152 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 DBR1Q9UK59 544 aaKnown RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 MCIDASD6RGH6 385 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 TEX46H3BTG2 121 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 RHOCP08134 193 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 UBA1P22314 1058 aaKnown RBP11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 LRIG3Q6UXM1 1119 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 CORO2BQ9UQ03 480 aa11.51□□□□□ -0.57
PTCHD1-201ENST00000379361 CYP21A2P08686 494 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 MTAPQ13126 283 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 BRSK2Q8IWQ3 736 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 PPIL6Q8IXY8 311 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 BDH2Q9BUT1 245 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 CD209Q9NNX6 404 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 ATP6V1B2P21281 511 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 STARP49675 285 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 ERP27Q96DN0 273 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 UBAP1Q9NZ09 502 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 TMEM2Q9UHN6 1383 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 CDC42BPAQ5VT25 1732 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 CCND1P24385 295 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 LHX1P48742 406 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 ABRQ12979 859 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 ZNF846Q147U1 533 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 BNC2Q6ZN30 1099 aaPredicted RBP11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 RDM1Q8NG50 284 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 ACTR8Q9H981 624 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 CMTM6Q9NX76 183 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 FER1L6Q2WGJ9 1857 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 WEE2P0C1S8 567 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 TMC7Q7Z402 723 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 SETD9Q8NE22 299 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 NIF3L1Q9GZT8 377 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 SLC9A8Q9Y2E8 581 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 SNUPNO95149 360 aaKnown RBP11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 RGL4Q8IZJ4 473 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 MYCBPAPQ8TBZ2 947 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 KCNB2Q92953 911 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 NCKIPSDQ9NZQ3 722 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 PHF11Q9UIL8 331 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 GRXCR2A6NFK2 248 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms