RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SDE2Q6IQ49 451 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 CACNA2D4Q7Z3S7 1137 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 SLC47A2Q86VL8 602 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 CHPFQ8IZ52 775 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 C1orf131Q8NDD1 294 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 ADAM32Q8TC27 787 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 HMGB4Q8WW32 186 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 NOX5Q96PH1 765 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 PLCB1Q9NQ66 1216 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 FANCLQ9NW38 375 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 CYTH4Q9UIA0 394 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 NAALADL1Q9UQQ1 740 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 INVSQ9Y283 1065 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 SYNJ2BP-COX16A0A087WUM0 186 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 CCDC163A0A0D9SF12 145 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 DCLK1O15075 740 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 MOCS2O96007 188 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 PENKP01210 267 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 HOXB2P14652 356 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 CDK11BP21127 795 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 MYL5Q02045 173 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 ARID5AQ03989 594 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 SPEM2Q0P670 501 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 KCNMA1Q12791 1236 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 MEA1Q16626 185 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 HSF5Q4G112 596 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 KLHDC7AQ5VTJ3 777 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 TAF3Q5VWG9 929 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 FYB2Q5VWT5 728 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 NUGGCQ68CJ6 796 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 OR6B2Q6IFH4 312 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 MSANTD2Q6P1R3 559 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 TMEM92Q6UXU6 159 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 TAC4Q86UU9 113 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 KBTBD6Q86V97 674 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 FAM160A2Q8N612 972 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 MDGA1Q8NFP4 955 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 DQX1Q8TE96 717 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 IPO4Q8TEX9 1081 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 STK32AQ8WU08 396 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 PPP1R13BQ96KQ4 1090 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 SERPINB11Q96P15 392 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 TRIM62Q9BVG3 475 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 COX16Q9P0S2 106 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 TJP2Q9UDY2 1190 aa12.06□□□□□ -0.48
SMARCE1-203ENST00000377808 A0A0A0MRY4 1105 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 PRRT4C9JH25 899 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 ZBTB24O43167 697 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 PAPSS1O43252 624 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 ADAM23O75077 832 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 GRAP2O75791 330 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 RETP07949 1114 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 HNRNPLP14866 589 aaKnown RBP eCLIP12.05□□□□□ -0.483e-11■■□□□ 13.3
SMARCE1-203ENST00000377808 UCHL3P15374 230 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 CLCN1P35523 988 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 SLC11A2P49281 568 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 KLK7P49862 253 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 BPIFB4P59827 614 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 TYRO3Q06418 890 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 MPPE1Q53F39 396 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 USP39Q53GS9 565 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 CDKAL1Q5VV42 579 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 CAVIN1Q6NZI2 390 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 ANKS1BQ7Z6G8 1248 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 UNC45BQ8IWX7 931 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 CPXM2Q8N436 756 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 AOPEPQ8N6M6 819 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 P2RY11Q96G91 374 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 CPXM1Q96SM3 734 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 CIPCQ9C0C6 399 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 FAM204AQ9H8W3 233 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 POPDC2Q9HBU9 364 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 FAM207AQ9NSI2 230 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 CACNA2D2Q9NY47 1150 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 TMEM63CQ9P1W3 806 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 EBF1Q9UH73 591 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 PCDHGC3Q9UN70 934 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 RAD54BQ9Y620 910 aa12.05□□□□□ -0.48
SMARCE1-203ENST00000377808 PTPRZ1P23471 2315 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 GOLGA6L7A0A1B0GV03 622 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 TYW5A2RUC4 315 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 TBL1XO60907 577 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 LATS1O95835 1130 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 APOEP02649 317 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 FYNP06241 537 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 CISD3P0C7P0 127 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 NTSR1P30989 418 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 RPL34P49207 117 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 COPB1P53618 953 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 SNX16P57768 344 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 POLR2FP61218 127 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 ELF2Q15723 593 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 CCDC6Q16204 474 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 GEN1Q17RS7 908 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 DCAF6Q58WW2 860 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 ADGRF1Q5T601 910 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 RFWD3Q6PCD5 774 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 FAM183BPQ6ZVS7 135 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 TMEM110Q86TL2 294 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms