RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 C22orf31O95567 290 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 APOC2P02655 101 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 DRD4P21917 467 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 ASPAP45381 313 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 GJA9P57773 515 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 OCRLQ01968 901 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 DDR2Q16832 855 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 ANKRD20A8PQ5CZ79 823 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 ATPAF2Q8N5M1 289 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 CCDC185Q8N715 623 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 NPLOC4Q8TAT6 608 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 BLOC1S5Q8TDH9 187 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 GIPC2Q8TF65 315 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 PTPRN2Q92932 1015 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 AZIN2Q96A70 460 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 PGM2Q96G03 612 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 RPRD1AQ96P16 312 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 RNF157Q96PX1 679 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 OSBPL7Q9BZF2 842 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 AFF4Q9UHB7 1163 aaKnown RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 ITGA11Q9UKX5 1188 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 VANGL2Q9ULK5 521 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 MYBPHLA2RUH7 354 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 PABPN1LA6NDY0 278 aaKnown RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 E9PBE3 544 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 KLHL41O60662 606 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 PTPN1P18031 435 aaKnown RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 PGM1P36871 562 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 FLT3LGP49771 235 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 ITGA9Q13797 1035 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 PDCD2Q16342 344 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 SH2D4BQ5SQS7 431 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 ATG16L1Q676U5 607 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 TRIM67Q6ZTA4 783 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 BZW1Q7L1Q6 419 aaKnown RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 MREGQ8N565 214 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 ZCCHC9Q8N567 271 aaKnown RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 B3GALNT2Q8NCR0 500 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 MAML3Q96JK9 1138 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 EXOC2Q96KP1 924 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 GLT1D1Q96MS3 346 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 ZMAT2Q96NC0 199 aaKnown RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 CAB39LQ9H9S4 337 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 VTA1Q9NP79 307 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 CYTH4Q9UIA0 394 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 USH1CQ9Y6N9 552 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 GRIN2DO15399 1336 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 C3orf70A6NLC5 250 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 CILPO75339 1184 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 TMEM63AO94886 807 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 CYP1A1P04798 512 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 MMP3P08254 477 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 MSX2P35548 267 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 ZNF143P52747 638 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 MSS51Q4VC12 460 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 TRMT10BQ6PF06 316 aaKnown RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 IFNEQ86WN2 208 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 CPT1BQ92523 772 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 FBXL18Q96ME1 805 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 SRPK1Q96SB4 655 aaKnown RBP11.49□□□□□ -0.57
HDAC6-203ENST00000376619 NOD2Q9HC29 1040 aa11.49□□□□□ -0.57
HDAC6-203ENST00000376619 A0A0G2JLL6 359 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-203ENST00000376619 TCRBV9S1A1TA0A576 114 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 ARHGAP1Q07960 439 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 CUL3Q13618 768 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 SNX17Q15036 470 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 TSNAXIP1Q2TAA8 658 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 ACCSLQ4AC99 568 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 FBXO48Q5FWF7 155 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 TSHZ1Q6ZSZ6 1077 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 PRRT2Q7Z6L0 340 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-203ENST00000376619 STRA8Q7Z7C7 330 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 HTR3CQ8WXA8 447 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 ZNF75CPQ92670 426 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-203ENST00000376619 XPNPEP3Q9NQH7 507 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 ETNK2Q9NVF9 386 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 UTP6Q9NYH9 597 aaKnown RBP11.48□□□□□ -0.57
HDAC6-203ENST00000376619 TMEM59LQ9UK28 342 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 NCF1BA6NI72 391 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-203ENST00000376619 NCF1CA8MVU1 366 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-203ENST00000376619 SNX3O60493 162 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 PQBP1O60828 265 aaKnown RBP11.48□□□□□ -0.57
HDAC6-203ENST00000376619 NCF1P14598 390 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-203ENST00000376619 CLCNKBP51801 687 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 RTP1P59025 263 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 OVOS1Q6IE37 1185 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 PTAR1Q7Z6K3 402 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-203ENST00000376619 PRPF39Q86UA1 669 aaKnown RBP11.48□□□□□ -0.57
HDAC6-203ENST00000376619 APBA2Q99767 749 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 IPPQ9Y573 584 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 VAPBO95292 243 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 ENO3P13929 434 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-203ENST00000376619 SLC8A1P32418 973 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 DCAF4L1Q3SXM0 396 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 SLC39A12Q504Y0 691 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 B3GNT9Q6UX72 402 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 RGS9BPQ6ZS82 235 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 CHSY1Q86X52 802 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 PIP4K2CQ8TBX8 421 aa11.48□□□□□ -0.57
HDAC6-203ENST00000376619 OMDQ99983 421 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms