RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 RAP1GAPP47736 663 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 WASHC5Q12768 1159 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 R3HDM1Q15032 1099 aaKnown RBP11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 ANKRD20A4Q4UJ75 823 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 UNC5AQ6ZN44 842 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 FRMD7Q6ZUT3 714 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 CCDC60Q8IWA6 550 aaPredicted RBP11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 TFB1MQ8WVM0 346 aaKnown RBP11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 PRICKLE1Q96MT3 831 aaPredicted RBP11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 RMDN3Q96TC7 470 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 CGRRF1Q99675 332 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 MRIQ9BWK5 157 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 MTMR12Q9C0I1 747 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 DEFB129Q9H1M3 183 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 C17orf75Q9HAS0 396 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 PCDHA10Q9Y5I2 948 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 SF3B1O75533 1304 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■■■■■ 121.1
TM9SF2-201ENST00000376387 H7C0C1 242 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 PENKP01210 267 aaPredicted RBP11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 ITGAXP20702 1163 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 ADORA2AP29274 412 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 ATP5OP48047 213 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 TEDDM1Q5T9Z0 273 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 FAM160B2Q86V87 743 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 LENG1Q96BZ8 264 aaPredicted RBP11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 CPXM1Q96SM3 734 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 IMPG2Q9BZV3 1241 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 USP29Q9HBJ7 922 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 EMCNQ9ULC0 261 aa11.88□□□□□ -0.51
TM9SF2-201ENST00000376387 F5H423 210 aaPredicted RBP11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 KCNN4O15554 427 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 APRTP07741 180 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 KRT7P08729 469 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 ATP6V1B1P15313 513 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 L1CAMP32004 1257 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 GRIA1P42261 906 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 COPAP53621 1224 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 KRT76Q01546 638 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 ZNF772Q68DY9 489 aaPredicted RBP11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 KLHDC10Q6PID8 442 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 LCA5Q86VQ0 697 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 THNSL1Q8IYQ7 743 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.87□□□□□ -0.518e-8■■■□□ 16.3
TM9SF2-201ENST00000376387 PDCD2LQ9BRP1 358 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 PNPLA8Q9NP80 782 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 CYP26B1Q9NR63 512 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 CCDC160A6NGH7 325 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 LRRIQ4A6NIV6 560 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 ADCY6O43306 1168 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 ERBB2P04626 1255 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 FGF3P11487 239 aaPredicted RBP11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 PRKCHP24723 683 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 MSX2P35548 267 aaPredicted RBP11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 SH3BGRP55822 239 aaPredicted RBP11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 PRKCEQ02156 737 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 NADK2Q4G0N4 442 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 MBLAC2Q68D91 279 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 ZBTB33Q86T24 672 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 RBM12BQ8IXT5 1001 aaKnown RBP11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 PPP1R14CQ8TAE6 165 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 GRIP2Q9C0E4 1043 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 IFT122Q9HBG6 1241 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 THAP1Q9NVV9 213 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 TMCO1Q9UM00 188 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 EFR3BQ9Y2G0 817 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 MAD1L1Q9Y6D9 718 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 ZNF646O15015 1829 aaPredicted RBP11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 PCNTO95613 3336 aa11.87□□□□□ -0.51
TM9SF2-201ENST00000376387 A0A1B0GTW7 788 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 SLC15A5A6NIM6 579 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 LSM8O95777 96 aaKnown RBP11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 ASS1P00966 412 aaKnown RBP11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 RBL1P28749 1068 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 PCSK6P29122 969 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 PMLP29590 882 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 SFNP31947 248 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 IDH3AP50213 366 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 IGBP1P78318 339 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 SNAPC2Q13487 334 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 PIWIL2Q8TC59 973 aaKnown RBP11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 OXCT2Q9BYC2 517 aaPredicted RBP11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 MAN1C1Q9NR34 630 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 PXMP2Q9NR77 195 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 APPL1Q9UKG1 709 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 NR2E3Q9Y5X4 410 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 STYXL1Q9Y6J8 313 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 SPDYE16A6NNV3 312 aaPredicted RBP11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 DGAT1O75907 488 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 ATG7O95352 703 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 APOEP02649 317 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 CD19P15391 556 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 NCF2P19878 526 aaPredicted RBP11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 OSBPP22059 807 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 CRHR1P34998 444 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 SLC1A6P48664 564 aa11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 HADHQ16836 314 aaKnown RBP11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 PPP6R3Q5H9R7 873 aaPredicted RBP11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 SDCCAG8Q86SQ7 713 aaPredicted RBP11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 CMASQ8NFW8 434 aaPredicted RBP11.86□□□□□ -0.51
TM9SF2-201ENST00000376387 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms