RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 RAB41Q5JT25 222 aa24.33■■□□□ 1.49
C9orf47-202ENST00000375850 KRBA2Q6ZNG9 492 aa24.33■■□□□ 1.49
C9orf47-202ENST00000375850 RSRC2Q7L4I2 434 aaKnown RBP24.33■■□□□ 1.49
C9orf47-202ENST00000375850 ANKRD52Q8NB46 1076 aa24.33■■□□□ 1.49
C9orf47-202ENST00000375850 PLD4Q96BZ4 506 aa24.33■■□□□ 1.49
C9orf47-202ENST00000375850 SCAND2PQ9GZW5 306 aaPredicted RBP24.33■■□□□ 1.49
C9orf47-202ENST00000375850 ITM2CQ9NQX7 267 aa24.33■■□□□ 1.49
C9orf47-202ENST00000375850 CISHQ9NSE2 258 aa24.33■■□□□ 1.49
C9orf47-202ENST00000375850 OLA1Q9NTK5 396 aaKnown RBP24.33■■□□□ 1.49
C9orf47-202ENST00000375850 RAB20Q9NX57 234 aa24.33■■□□□ 1.49
C9orf47-202ENST00000375850 MARCH2Q9P0N8 246 aa24.33■■□□□ 1.49
C9orf47-202ENST00000375850 ATP6V1DQ9Y5K8 247 aa24.33■■□□□ 1.49
C9orf47-202ENST00000375850 CHD6Q8TD26 2715 aa24.33■■□□□ 1.48
C9orf47-202ENST00000375850 CFAP47Q6ZTR5 3102 aa24.33■■□□□ 1.48
C9orf47-202ENST00000375850 PIGZQ86VD9 579 aa24.32■■□□□ 1.48
C9orf47-202ENST00000375850 DNASE2BQ8WZ79 361 aa24.32■■□□□ 1.48
C9orf47-202ENST00000375850 WSB2Q9NYS7 404 aaPredicted RBP24.32■■□□□ 1.48
C9orf47-202ENST00000375850 AGO1Q9UL18 857 aaKnown RBP24.32■■□□□ 1.48
C9orf47-202ENST00000375850 MAPK8IP1Q9UQF2 711 aa24.32■■□□□ 1.48
C9orf47-202ENST00000375850 GON4LQ3T8J9 2241 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 SPAARA0A1B0GVQ0 90 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 WASH3PC4AMC7 463 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 CETN3O15182 167 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 HYAL3O43820 417 aaPredicted RBP24.31■■□□□ 1.48
C9orf47-202ENST00000375850 TOP3BO95985 862 aaKnown RBP24.31■■□□□ 1.48
C9orf47-202ENST00000375850 PRR29P0C7W0 189 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 EPB41P11171 864 aaKnown RBP24.31■■□□□ 1.48
C9orf47-202ENST00000375850 CD59P13987 128 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 YWHAGP61981 247 aaKnown RBP eCLIP24.31■■□□□ 1.48
C9orf47-202ENST00000375850 PM20D1Q6GTS8 502 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 SLC4A11Q8NBS3 891 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 PIWIL1Q96J94 861 aaKnown RBP24.31■■□□□ 1.48
C9orf47-202ENST00000375850 FSCN3Q9NQT6 498 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 ELOVL2Q9NXB9 296 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 FRYQ5TBA9 3013 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 PI4KAP42356 2102 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 MYH10P35580 1976 aa24.31■■□□□ 1.48
C9orf47-202ENST00000375850 A0A1B0GTW7 788 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 FAM221BA6H8Z2 402 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 MEI4A8MW99 385 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 GJB3O75712 270 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 IGLV3-19P01714 112 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 IL12RB1P42701 662 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 RAD23BP54727 409 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 YWHAEP62258 255 aaKnown RBP24.3■■□□□ 1.48
C9orf47-202ENST00000375850 GEN1Q17RS7 908 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 DENND1CQ8IV53 801 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 FAM217AQ8IXS0 508 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 PRCCQ92733 491 aaPredicted RBP24.3■■□□□ 1.48
C9orf47-202ENST00000375850 SIPA1Q96FS4 1042 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 TOE1Q96GM8 510 aaKnown RBP24.3■■□□□ 1.48
C9orf47-202ENST00000375850 PCED1AQ9H1Q7 454 aa24.3■■□□□ 1.48
C9orf47-202ENST00000375850 PCDH15Q96QU1 1955 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 SLC12A8A0AV02 714 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 ZBED1O96006 694 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 HMBSP08397 361 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 HARS2P49590 506 aaKnown RBP24.29■■□□□ 1.48
C9orf47-202ENST00000375850 TKTL1P51854 596 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 PDE4CQ08493 712 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 MPPE1Q53F39 396 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 TMPRSS6Q8IU80 811 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 DDI1Q8WTU0 396 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 ZCCHC14Q8WYQ9 949 aaKnown RBP24.29■■□□□ 1.48
C9orf47-202ENST00000375850 SEMA4DQ92854 862 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 MKRN2Q9H000 416 aaKnown RBP24.29■■□□□ 1.48
C9orf47-202ENST00000375850 SLC6A17Q9H1V8 727 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 HBS1LQ9Y450 684 aaKnown RBP24.29■■□□□ 1.48
C9orf47-202ENST00000375850 PCDHB9Q9Y5E1 797 aa24.29■■□□□ 1.48
C9orf47-202ENST00000375850 XPO1O14980 1071 aaKnown RBP24.28■■□□□ 1.48
C9orf47-202ENST00000375850 LATS1O95835 1130 aa24.28■■□□□ 1.48
C9orf47-202ENST00000375850 ACADMP11310 421 aa24.28■■□□□ 1.48
C9orf47-202ENST00000375850 NCAM1P13591 858 aa24.28■■□□□ 1.48
C9orf47-202ENST00000375850 BCAT1P54687 386 aa24.28■■□□□ 1.48
C9orf47-202ENST00000375850 ARID5AQ03989 594 aa24.28■■□□□ 1.48
C9orf47-202ENST00000375850 ZNF234Q14588 700 aa24.28■■□□□ 1.48
C9orf47-202ENST00000375850 TRIP4Q15650 581 aaPredicted RBP24.28■■□□□ 1.48
C9orf47-202ENST00000375850 NUP58Q9BVL2 599 aa24.28■■□□□ 1.48
C9orf47-202ENST00000375850 RMND1Q9NWS8 449 aa24.28■■□□□ 1.48
C9orf47-202ENST00000375850 HESX1Q9UBX0 185 aa24.28■■□□□ 1.48
C9orf47-202ENST00000375850 PCNX2A6NKB5 2137 aa24.28■■□□□ 1.48
C9orf47-202ENST00000375850 TPMTP51580 245 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 GRIK2Q13002 908 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 TRIP6Q15654 476 aaKnown RBP24.27■■□□□ 1.48
C9orf47-202ENST00000375850 IL27RAQ6UWB1 636 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 SPRYD3Q8NCJ5 442 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 WFIKKN2Q8TEU8 576 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 P2RY11Q96G91 374 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 GPR174Q9BXC1 333 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 IRX2Q9BZI1 471 aaPredicted RBP24.27■■□□□ 1.48
C9orf47-202ENST00000375850 CIPCQ9C0C6 399 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 FBRSQ9HAH7 460 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 LRRC4Q9HBW1 653 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 CD93Q9NPY3 652 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 KIAA1257Q9ULG3 409 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 COQ4Q9Y3A0 265 aa24.27■■□□□ 1.48
C9orf47-202ENST00000375850 METTL12A8MUP2 240 aa24.26■■□□□ 1.47
C9orf47-202ENST00000375850 SLC16A3O15427 465 aaKnown RBP24.26■■□□□ 1.47
C9orf47-202ENST00000375850 ZNF202O95125 648 aa24.26■■□□□ 1.47
C9orf47-202ENST00000375850 ZNF883P0CG24 379 aa24.26■■□□□ 1.47
C9orf47-202ENST00000375850 BST2Q10589 180 aaKnown RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms