RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PTGESO14684 152 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 WFS1O76024 890 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 EPHB2P29323 1055 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 FOXN2P32314 431 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 ELK3P41970 407 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 ACADSBP45954 432 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 SESN3P58005 492 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 USP4Q13107 963 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 RASA2Q15283 850 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 DENND1AQ8TEH3 1009 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 ERP27Q96DN0 273 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 HSFY1Q96LI6 401 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 ZFP42Q96MM3 310 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 CYLDQ9NQC7 956 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 PAK5Q9P286 719 aa14.48□□□□□ -0.09
MSH5-202ENST00000375740 G3BP2Q9UN86 482 aaKnown RBP14.48□□□□□ -0.09
MSH5-202ENST00000375740 BCLAF3A2AJT9 711 aaKnown RBP14.47□□□□□ -0.09
MSH5-202ENST00000375740 MYADML2A6NDP7 307 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 ZBED1O96006 694 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 WARSP23381 471 aaKnown RBP14.47□□□□□ -0.09
MSH5-202ENST00000375740 ACAT1P24752 427 aaKnown RBP14.47□□□□□ -0.09
MSH5-202ENST00000375740 HOXC8P31273 242 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 SCNN1AP37088 669 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 OR52E8Q6IFG1 317 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 ARCQ7LC44 396 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 VSIG1Q86XK7 387 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 B3GALNT2Q8NCR0 500 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 B4GALNT2Q8NHY0 566 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 RTP4Q96DX8 246 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 TNIP3Q96KP6 325 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 SMC6Q96SB8 1091 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 ACSS3Q9H6R3 686 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.47□□□□□ -0.09
MSH5-202ENST00000375740 CLDN5O00501 218 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 CYB561D2O14569 222 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 PRPF4O43172 522 aaKnown RBP eCLIP14.47□□□□□ -0.09
MSH5-202ENST00000375740 AVILO75366 819 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 ALDH3A1P30838 453 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 IL9RQ01113 521 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 KLC1Q07866 573 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 DPYSL2Q16555 572 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 FAXCQ5TGI0 409 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 ZNF449Q6P9G9 518 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 PIGZQ86VD9 579 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 TOP6BLQ8N6T0 577 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 CCDC185Q8N715 623 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 DNAJC9Q8WXX5 260 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 SPOCK2Q92563 424 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 APBA2Q99767 749 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 DNAI2Q9GZS0 605 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 MTMR10Q9NXD2 777 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 CACNG4Q9UBN1 327 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 FETUBQ9UGM5 382 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 AP4E1Q9UPM8 1137 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 CHKBQ9Y259 395 aa14.47□□□□□ -0.09
MSH5-202ENST00000375740 CFAP69A5D8W1 941 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 MEIS3P2A8K0S8 358 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 XPO1O14980 1071 aaKnown RBP14.46□□□□□ -0.09
MSH5-202ENST00000375740 CHADO15335 359 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 ASMTLO95671 621 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 IGHA2P01877 340 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 C6orf222P0C671 652 aaPredicted RBP14.46□□□□□ -0.09
MSH5-202ENST00000375740 T-ENOLP0DO92 83 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 TAC1P20366 129 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 LRPAP1P30533 357 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 RPA3P35244 121 aaPredicted RBP14.46□□□□□ -0.09
MSH5-202ENST00000375740 GBE1Q04446 702 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 SLC10A2Q12908 348 aaPredicted RBP14.46□□□□□ -0.09
MSH5-202ENST00000375740 EFHC1Q5JVL4 640 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 ADGRD1Q6QNK2 874 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 DEFB106AQ8N104 65 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 FAM136AQ96C01 138 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 SLC7A6OSQ96CW6 309 aaPredicted RBP14.46□□□□□ -0.09
MSH5-202ENST00000375740 KCTD15Q96SI1 283 aaPredicted RBP14.46□□□□□ -0.09
MSH5-202ENST00000375740 PAFAH2Q99487 392 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 HNRNPABQ99729 332 aaKnown RBP14.46□□□□□ -0.09
MSH5-202ENST00000375740 DHRS4Q9BTZ2 278 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 TBC1D10AQ9BXI6 508 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 DENND2DQ9H6A0 471 aaPredicted RBP14.46□□□□□ -0.09
MSH5-202ENST00000375740 SENP1Q9P0U3 644 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 TEX264Q9Y6I9 313 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 PCNTO95613 3336 aa14.46□□□□□ -0.09
MSH5-202ENST00000375740 ZNF487B1APH4 448 aa14.46□□□□□ -0.1
MSH5-202ENST00000375740 TNPO2O14787 897 aaKnown RBP14.46□□□□□ -0.1
MSH5-202ENST00000375740 BEST1O76090 585 aa14.46□□□□□ -0.1
MSH5-202ENST00000375740 CBX6O95503 412 aa14.46□□□□□ -0.1
MSH5-202ENST00000375740 RARBP10826 455 aa14.46□□□□□ -0.1
MSH5-202ENST00000375740 LBRQ14739 615 aaKnown RBP14.46□□□□□ -0.1
MSH5-202ENST00000375740 PDCD2Q16342 344 aaPredicted RBP14.46□□□□□ -0.1
MSH5-202ENST00000375740 KLHL38Q2WGJ6 581 aa14.46□□□□□ -0.1
MSH5-202ENST00000375740 WSCD1Q658N2 575 aa14.46□□□□□ -0.1
MSH5-202ENST00000375740 RNF43Q68DV7 783 aa14.46□□□□□ -0.1
MSH5-202ENST00000375740 CCDC33Q8N5R6 958 aa14.46□□□□□ -0.1
MSH5-202ENST00000375740 PPP1R10Q96QC0 940 aaKnown RBP14.46□□□□□ -0.1
MSH5-202ENST00000375740 RAB3IPQ96QF0 476 aaPredicted RBP14.46□□□□□ -0.1
MSH5-202ENST00000375740 GORASP1Q9BQQ3 440 aa14.46□□□□□ -0.1
MSH5-202ENST00000375740 DUSP16Q9BY84 665 aa14.46□□□□□ -0.1
MSH5-202ENST00000375740 LMCD1Q9NZU5 365 aa14.46□□□□□ -0.1
MSH5-202ENST00000375740 SMG5Q9UPR3 1016 aaKnown RBP14.46□□□□□ -0.1
MSH5-202ENST00000375740 AKR1A1P14550 325 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms