RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 CEP70Q8NHQ1 597 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 GDPD5Q8WTR4 605 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 HTR3CQ8WXA8 447 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 ASCC2Q9H1I8 757 aaPredicted RBP13.55□□□□□ -0.24
CUL4A-203ENST00000375441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.55□□□□□ -0.24
CUL4A-203ENST00000375441 MAFBQ9Y5Q3 323 aaPredicted RBP13.55□□□□□ -0.24
CUL4A-203ENST00000375441 SLC4A7Q9Y6M7 1214 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 NHSL1Q5SYE7 1610 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 UGT1A9O60656 530 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 FLOT2Q14254 428 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 CYTH1Q15438 398 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 STRA8Q7Z7C7 330 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 ELOVL4Q9GZR5 314 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 TRPV6Q9H1D0 765 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 UGT1A7Q9HAW7 530 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 UGT1A10Q9HAW8 530 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 UGT1A8Q9HAW9 530 aa13.55□□□□□ -0.24
CUL4A-203ENST00000375441 CPSF3Q9UKF6 684 aaKnown RBP13.55□□□□□ -0.24
CUL4A-203ENST00000375441 hCG_2014768A0A024R1R8 64 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 ABLIM1O14639 778 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 SERPINA6P08185 405 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 TGFB3P10600 412 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 ABCG1P45844 678 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 SLC6A3Q01959 620 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 Q3C1V9 767 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 TMEM63BQ5T3F8 832 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 RNF169Q8NCN4 708 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 ECSITQ9BQ95 431 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 ILKAPQ9H0C8 392 aaPredicted RBP13.54□□□□□ -0.24
CUL4A-203ENST00000375441 NRDE2Q9H7Z3 1164 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 TNRC6CQ9HCJ0 1690 aaKnown RBP13.54□□□□□ -0.24
CUL4A-203ENST00000375441 CNTNAP1P78357 1384 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 EEF2KO00418 725 aaKnown RBP13.54□□□□□ -0.24
CUL4A-203ENST00000375441 TM7SF2O76062 418 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 RANBP1P43487 201 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 TPI1P60174 286 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 SP2Q02086 613 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 DEUP1Q05D60 604 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 CATSPERGQ6ZRH7 1159 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 C7orf26Q96N11 449 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 NAT9Q9BTE0 207 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 EFHD1Q9BUP0 239 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 SUDS3Q9H7L9 328 aaPredicted RBP13.54□□□□□ -0.24
CUL4A-203ENST00000375441 PCDH18Q9HCL0 1135 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 THEGQ9P2T0 379 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 HBS1LQ9Y450 684 aaKnown RBP13.54□□□□□ -0.24
CUL4A-203ENST00000375441 CNTNAP2Q9UHC6 1331 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 KAT6AQ92794 2004 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 LAMB2P55268 1798 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 USP12O75317 370 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 ERVK-10P10266 1014 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 RARBP10826 455 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 RAG1P15918 1043 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 ZNF252P-AS1Q0IIN9 211 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 TRMT10BQ6PF06 316 aaKnown RBP13.54□□□□□ -0.24
CUL4A-203ENST00000375441 DPP9Q86TI2 863 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 CCNJLQ8IV13 435 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 USP33Q8TEY7 942 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 FAXDC2Q96IV6 333 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 XPNPEP3Q9NQH7 507 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 RNF19AQ9NV58 838 aa13.54□□□□□ -0.24
CUL4A-203ENST00000375441 FAF1Q9UNN5 650 aaPredicted RBP13.54□□□□□ -0.24
CUL4A-203ENST00000375441 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
CUL4A-203ENST00000375441 CXorf49A8MYA2 514 aaPredicted RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 KCNK1O00180 336 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 GCAP28676 217 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 GLRBP48167 497 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 SLC25A11Q02978 314 aaKnown RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 LBRQ14739 615 aaKnown RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 C16orf89Q6UX73 402 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 KDELC2Q7Z4H8 507 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 MFN1Q8IWA4 741 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 RNF148Q8N7C7 305 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 CMASQ8NFW8 434 aaPredicted RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 JADE3Q92613 823 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 ABTB1Q969K4 478 aaPredicted RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 NMD3Q96D46 503 aaKnown RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 MIPEPQ99797 713 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 SYT15Q9BQS2 421 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 ASB7Q9H672 318 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 ANLNQ9NQW6 1124 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 MAN1C1Q9NR34 630 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 ABCA3Q99758 1704 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 NOL3O60936 208 aaKnown RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 FARP2O94887 1054 aaPredicted RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 PTPN7P35236 360 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 GNL1P36915 607 aaPredicted RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 STX1BP61266 288 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 OCRLQ01968 901 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 ROR2Q01974 943 aaKnown RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 BTKQ06187 659 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 WASHC5Q12768 1159 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 PLEKHG4Q58EX7 1191 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 ARCQ7LC44 396 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 C1orf127Q8N9H9 656 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 USP6NLQ92738 828 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 PRR11Q96HE9 360 aaPredicted RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 HIC2Q96JB3 615 aa13.53□□□□□ -0.24
CUL4A-203ENST00000375441 NIFKQ9BYG3 293 aaKnown RBP13.53□□□□□ -0.24
CUL4A-203ENST00000375441 RNPEPQ9H4A4 650 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms