RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ATP11CQ8NB49 1132 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 SLAIN1Q8ND83 568 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 MAML1Q92585 1016 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 OLFM3Q96PB7 478 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 SLC9A7Q96T83 725 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 DMAP1Q9NPF5 467 aaPredicted RBP20.29■□□□□ 0.84
HDAC1-201ENST00000373548 ANLNQ9NQW6 1124 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 COL4A4P53420 1690 aaPredicted RBP20.29■□□□□ 0.84
HDAC1-201ENST00000373548 H3BRJ5 948 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 ARVCFO00192 962 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 DGKIO75912 1065 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 SSTR1P30872 391 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 EFHC2Q5JST6 749 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 FAXCQ5TGI0 409 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 THEM5Q8N1Q8 247 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 INTS9Q9NV88 658 aaKnown RBP20.29■□□□□ 0.84
HDAC1-201ENST00000373548 POC1B-GALNT4F8VUJ3 575 aa20.28■□□□□ 0.84
HDAC1-201ENST00000373548 I6L893 689 aaPredicted RBP20.28■□□□□ 0.84
HDAC1-201ENST00000373548 MFSD11O43934 449 aa20.28■□□□□ 0.84
HDAC1-201ENST00000373548 ADRA1BP35368 520 aa20.28■□□□□ 0.84
HDAC1-201ENST00000373548 TMED2Q15363 201 aa20.28■□□□□ 0.84
HDAC1-201ENST00000373548 NOMO2Q5JPE7 1267 aa20.28■□□□□ 0.84
HDAC1-201ENST00000373548 PM20D1Q6GTS8 502 aa20.28■□□□□ 0.84
HDAC1-201ENST00000373548 NTAN1Q96AB6 310 aa20.28■□□□□ 0.84
HDAC1-201ENST00000373548 PGAP3Q96FM1 320 aaPredicted RBP20.28■□□□□ 0.84
HDAC1-201ENST00000373548 PRDM16Q9HAZ2 1276 aa20.28■□□□□ 0.84
HDAC1-201ENST00000373548 RABGEF1Q9UJ41 708 aa20.28■□□□□ 0.84
HDAC1-201ENST00000373548 PCDHB8Q9UN66 801 aa20.28■□□□□ 0.84
HDAC1-201ENST00000373548 TMEM120BA0PK00 339 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 ARHGEF37A1IGU5 675 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 CREB3O43889 395 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 GCATO75600 419 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 AMHP03971 560 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 GRK4P32298 578 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 MAGEA6P43360 314 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 TADA2BQ86TJ2 420 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 IGDCC3Q8IVU1 814 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 IRGQQ8WZA9 623 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 EDEM1Q92611 657 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 FAM107BQ9H098 131 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 KLC2Q9H0B6 622 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 ETNK1Q9HBU6 452 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 PHF24Q9UPV7 400 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 TSPY1Q01534 308 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 SCAPQ12770 1279 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 DPYSQ14117 519 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 MAPRE1Q15691 268 aaKnown RBP20.27■□□□□ 0.84
HDAC1-201ENST00000373548 PPP1R21Q6ZMI0 780 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 SRRM1Q8IYB3 904 aaKnown RBP20.27■□□□□ 0.84
HDAC1-201ENST00000373548 COLGALT2Q8IYK4 626 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 DDIT4Q9NX09 232 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 RRN3Q9NYV6 651 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 FBXW11Q9UKB1 542 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 CHMP2BQ9UQN3 213 aa20.27■□□□□ 0.84
HDAC1-201ENST00000373548 FAM72CH0Y354 149 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 VAV1P15498 845 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 PHBP35232 272 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 MAP2K2P36507 400 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 ELK3P41970 407 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 APLP1P51693 650 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 AIF1P55008 147 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 YWHAHQ04917 246 aaPredicted RBP20.26■□□□□ 0.83
HDAC1-201ENST00000373548 CBLBQ13191 982 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 FAM72AQ5TYM5 149 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 FAM72DQ6L9T8 149 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 C4orf22Q6V702 233 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 C3orf62Q6ZUJ4 267 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 RFX8Q6ZV50 586 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 LRRC8DQ7L1W4 858 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 FAM72BQ86X60 149 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 SCML4Q8N228 414 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 URGCPQ8TCY9 931 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 TFB1MQ8WVM0 346 aaKnown RBP20.26■□□□□ 0.83
HDAC1-201ENST00000373548 TBC1D13Q9NVG8 400 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 C5orf60A6NFR6 353 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 HACD1B0YJ81 288 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 EEF2KO00418 725 aaKnown RBP20.26■□□□□ 0.83
HDAC1-201ENST00000373548 EBAG9O00559 213 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 METTL18O95568 372 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 BRAFP15056 766 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 SEMA3BQ13214 749 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 MPP2Q14168 576 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 BSPRYQ5W0U4 402 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 HEATR6Q6AI08 1181 aaKnown RBP20.26■□□□□ 0.83
HDAC1-201ENST00000373548 PALM2Q8IXS6 379 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 AGGF1Q8N302 714 aaeCLIP20.26■□□□□ 0.833e-8■■■□□ 15.2
HDAC1-201ENST00000373548 PPCSQ9HAB8 311 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 PNPLA8Q9NP80 782 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.26■□□□□ 0.83
HDAC1-201ENST00000373548 SLC24A2Q9UI40 661 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 NR2E3Q9Y5X4 410 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 ACTL7BQ9Y614 415 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 TEX264Q9Y6I9 313 aa20.26■□□□□ 0.83
HDAC1-201ENST00000373548 TMEM189-UBE2V1I3L0A0 370 aa20.25■□□□□ 0.83
HDAC1-201ENST00000373548 FKTNO75072 461 aa20.25■□□□□ 0.83
HDAC1-201ENST00000373548 AVILO75366 819 aa20.25■□□□□ 0.83
HDAC1-201ENST00000373548 APRTP07741 180 aa20.25■□□□□ 0.83
HDAC1-201ENST00000373548 TSHRP16473 764 aa20.25■□□□□ 0.83
HDAC1-201ENST00000373548 EFTUD2Q15029 972 aaKnown RBP eCLIP20.25■□□□□ 0.835e-11■■■■□ 20.9
HDAC1-201ENST00000373548 RASA2Q15283 850 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms