RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 SNRPFP62306 86 aaKnown RBP6.77□□□□□ -1.32
CHD6-203ENST00000373233 SLC5A9Q2M3M2 681 aa6.77□□□□□ -1.32
CHD6-203ENST00000373233 TRIM65Q6PJ69 517 aa6.77□□□□□ -1.32
CHD6-203ENST00000373233 EXT2Q93063 718 aa6.77□□□□□ -1.32
CHD6-203ENST00000373233 ALKBH8Q96BT7 664 aaKnown RBP6.77□□□□□ -1.32
CHD6-203ENST00000373233 WNT8AQ9H1J5 351 aa6.77□□□□□ -1.32
CHD6-203ENST00000373233 PNPLA3Q9NST1 481 aa6.77□□□□□ -1.32
CHD6-203ENST00000373233 SCN3BQ9NY72 215 aa6.77□□□□□ -1.32
CHD6-203ENST00000373233 AGO2Q9UKV8 859 aaKnown RBP6.77□□□□□ -1.32
CHD6-203ENST00000373233 F8W810 466 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 FZD9O00144 591 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 GAS2O43903 313 aaKnown RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 PRKCBP05771 671 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 HSMCR30P0CW71 290 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 BMP6P22004 513 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 IL12AP29459 219 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 HUNKP57058 714 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 SNRNP35Q16560 246 aaKnown RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 AASDHQ4L235 1098 aaPredicted RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 KIAA1755Q5JYT7 1200 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 MEI1Q5TIA1 1274 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 C11orf88Q6PI97 169 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 DNERQ8NFT8 737 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 GMLQ99445 158 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 FARSBQ9NSD9 589 aaKnown RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 CDK17Q00537 523 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 PPATQ06203 517 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 FOXD4Q12950 439 aaPredicted RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 ARHGEF19Q8IW93 802 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 AGR3Q8TD06 166 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 TATDN2Q93075 761 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 ERLEC1Q96DZ1 483 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 MTHFD1LQ6UB35 978 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 RAD9BQ6WBX8 426 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 KIAA0408Q6ZU52 694 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 KRT74Q7RTS7 529 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 ANKRD23Q86SG2 305 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 OR6Y1Q8NGX8 325 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 SHCBP1LQ9BZQ2 653 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 PLEKHA5Q9HAU0 1116 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 AGPAT3Q9NRZ7 376 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 VAV3Q9UKW4 847 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 VPS4AQ9UN37 437 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 V9GYQ6 96 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 RBBP6Q7Z6E9 1792 aaKnown RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 TNPO2O14787 897 aaKnown RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 ENTPD5O75356 428 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 MAGEA2P43356 314 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 GPC3P51654 580 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 HSD17B4P51659 736 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 HERVK_113P62684 666 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 OCLNQ16625 522 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 TAF8Q7Z7C8 310 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.77□□□□□ -1.33
CHD6-203ENST00000373233 SCFD1Q8WVM8 642 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 RFFLQ8WZ73 363 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 PROX1Q92786 737 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 RGS17Q9UGC6 210 aaPredicted RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 CDYLQ9Y232 598 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 ZNFX1Q9P2E3 1918 aaKnown RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 CCDC88CQ9P219 2028 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 APOA4P06727 396 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 NPEPPSP55786 919 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 CCDC33Q8N5R6 958 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 MED10Q9BTT4 135 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 PCSK1NQ9UHG2 260 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 BARX2Q9UMQ3 279 aaPredicted RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 PHTF1Q9UMS5 762 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 A0A1W2PQJ5 194 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 ZSCAN9O15535 394 aaPredicted RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 KLRC4O43908 158 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 CCNKO75909 580 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 IFNA16P05015 189 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 TOP3AQ13472 1001 aaPredicted RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 ZNF699Q32M78 642 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 CENPPQ6IPU0 288 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 PRR23BQ6ZRT6 265 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 KCNK18Q7Z418 384 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 RNF149Q8NC42 400 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 ATXN2LQ8WWM7 1075 aaKnown RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 PDCD2LQ9BRP1 358 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 BTBD10Q9BSF8 475 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 KRT87PA6NCN2 255 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 PDHXO00330 501 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 KIAA0391O15091 583 aaKnown RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 CLDN3O15551 220 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 SHOX2O60902 331 aaPredicted RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 ITGALP20701 1170 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 RIPK1Q13546 671 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 NAB2Q15742 525 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 USP38Q8NB14 1042 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 MINDY2Q8NBR6 621 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 PDCD6IPQ8WUM4 868 aaKnown RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 MAGEB16A2A368 324 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 SH3D21A4FU49 640 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 PSMD10O75832 226 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 FCGR1AP12314 374 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 FXR1P51114 621 aaKnown RBP eCLIP6.77□□□□□ -1.33
CHD6-203ENST00000373233 MXD4Q14582 209 aaPredicted RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 DSTYKQ6XUX3 929 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms