RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 UBA3Q8TBC4 463 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 AGR3Q8TD06 166 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 SLC7A3Q8WY07 619 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 PIWIL1Q96J94 861 aaKnown RBP14.14□□□□□ -0.15
USP49-201ENST00000373006 IFT122Q9HBG6 1241 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 HMGXB4Q9UGU5 601 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 LY75O60449 1722 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 C15orf38-AP3S2A0A0A6YYH1 394 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 MYOCOSA0A1B0GUC4 107 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 TRDMT1O14717 391 aaKnown RBP14.14□□□□□ -0.15
USP49-201ENST00000373006 DCXO43602 365 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 CCNT2O60583 730 aaKnown RBP14.14□□□□□ -0.15
USP49-201ENST00000373006 DKC1O60832 514 aaKnown RBP eCLIP14.14□□□□□ -0.15
USP49-201ENST00000373006 METTL18O95568 372 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 ATP6V1B1P15313 513 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 NAMPTP43490 491 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 KRT81Q14533 505 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 ARPINQ7Z6K5 226 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 PLD5Q8N7P1 536 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 DTNBP1Q96EV8 351 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 ADPGKQ9BRR6 497 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 CCDC28BQ9BUN5 200 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 SPDYE16A6NNV3 312 aaPredicted RBP14.13□□□□□ -0.15
USP49-201ENST00000373006 ARRB2P32121 409 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 IDH3AP50213 366 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 TBL3Q12788 808 aaKnown RBP14.13□□□□□ -0.15
USP49-201ENST00000373006 MTA1Q13330 715 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 R3HDM1Q15032 1099 aaKnown RBP14.13□□□□□ -0.15
USP49-201ENST00000373006 TLR1Q15399 786 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 MBLAC2Q68D91 279 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 CASC4Q6P4E1 433 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 PAOXQ6QHF9 649 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 UGT2A3Q6UWM9 527 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 RBM44Q6ZP01 1051 aaKnown RBP14.13□□□□□ -0.15
USP49-201ENST00000373006 UBR3Q6ZT12 1888 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 WDR49Q8IV35 697 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 BRSK2Q8IWQ3 736 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 ANKRD31Q8N7Z5 1873 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 GPRASP2Q96D09 838 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 ATG4CQ96DT6 458 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 CCDC97Q96F63 343 aaPredicted RBP14.13□□□□□ -0.15
USP49-201ENST00000373006 TWNKQ96RR1 684 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 KLC2Q9H0B6 622 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.13□□□□□ -0.15
USP49-201ENST00000373006 WDR46O15213 610 aaKnown RBP14.13□□□□□ -0.15
USP49-201ENST00000373006 BIRC5O15392 142 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 KLHL2O95198 593 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 SRGAP2CP0DJJ0 459 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 FGF3P11487 239 aaPredicted RBP14.13□□□□□ -0.15
USP49-201ENST00000373006 ITGAXP20702 1163 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 ATXN3P54252 364 aaPredicted RBP14.13□□□□□ -0.15
USP49-201ENST00000373006 BCAR1P56945 870 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 GHRHRQ02643 423 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 PRKG1Q13976 671 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 MAP7Q14244 749 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 GRM2Q14416 872 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 ANKRD20A4Q4UJ75 823 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 PPM1JQ5JR12 505 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 PDPK2PQ6A1A2 396 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 PGM2L1Q6PCE3 622 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 C10orf107Q8IVU9 208 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 FNIP1Q8TF40 1166 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 TFB1MQ8WVM0 346 aaKnown RBP14.13□□□□□ -0.15
USP49-201ENST00000373006 PRPF31Q8WWY3 499 aaKnown RBP14.13□□□□□ -0.15
USP49-201ENST00000373006 CLMNQ96JQ2 1002 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 RNF157Q96PX1 679 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 EMCNQ9ULC0 261 aa14.13□□□□□ -0.15
USP49-201ENST00000373006 PDGFRAP16234 1089 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 CAPSQ13938 189 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 GK3PQ14409 553 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 ACAP1Q15027 740 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 PPP6R3Q5H9R7 873 aaPredicted RBP14.12□□□□□ -0.15
USP49-201ENST00000373006 TRNP1Q6NT89 227 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 SIGLEC10Q96LC7 697 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 SDCBP2Q9H190 292 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 ASNSD1Q9NWL6 643 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 PHF24Q9UPV7 400 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 E9PBE3 544 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 ADCY3O60266 1144 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 ONECUT3O60422 494 aaPredicted RBP14.12□□□□□ -0.15
USP49-201ENST00000373006 KLHL41O60662 606 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 RSBN1LQ6PCB5 846 aaPredicted RBP14.12□□□□□ -0.15
USP49-201ENST00000373006 ARCQ7LC44 396 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 TMC7Q7Z402 723 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 DEFB132Q7Z7B7 95 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 GSDMBQ8TAX9 411 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 ACTRT2Q8TDY3 377 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 RXFP2Q8WXD0 754 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 MIS12Q9H081 205 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 XYLT2Q9H1B5 865 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 ZNF358Q9NW07 568 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 UBAP1Q9NZ09 502 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 APPL1Q9UKG1 709 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 H3BNX3 289 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 TPP1O14773 563 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 PRPSAP2O60256 369 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 PIGRP01833 764 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 ALDOAP04075 364 aaKnown RBP14.12□□□□□ -0.15
USP49-201ENST00000373006 ASLP04424 464 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 F7P08709 466 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms