RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 VPS33BQ9H267 617 aa15.3■□□□□ 0.04
COL9A2-202ENST00000372748 USP29Q9HBJ7 922 aa15.3■□□□□ 0.04
COL9A2-202ENST00000372748 PNPLA8Q9NP80 782 aa15.3■□□□□ 0.04
COL9A2-202ENST00000372748 PNPOQ9NVS9 261 aa15.3■□□□□ 0.04
COL9A2-202ENST00000372748 GPATCH2LQ9NWQ4 482 aa15.3■□□□□ 0.04
COL9A2-202ENST00000372748 ZNF180Q9UJW8 692 aa15.3■□□□□ 0.04
COL9A2-202ENST00000372748 PHIPQ8WWQ0 1821 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 C15orf38-AP3S2A0A0A6YYH1 394 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.29■□□□□ 0.04
COL9A2-202ENST00000372748 HNRNPRO43390 633 aaKnown RBP15.29■□□□□ 0.04
COL9A2-202ENST00000372748 GRAP2O75791 330 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 ATG7O95352 703 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 PRKCHP24723 683 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 GRIA1P42261 906 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 C15orf59Q2T9L4 293 aaPredicted RBP15.29■□□□□ 0.04
COL9A2-202ENST00000372748 MAVSQ7Z434 540 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 ARPINQ7Z6K5 226 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 XYLT1Q86Y38 959 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 BRSK2Q8IWQ3 736 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 RSAD1Q9HA92 442 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 CCNT2O60583 730 aaKnown RBP15.29■□□□□ 0.04
COL9A2-202ENST00000372748 GJB1P08034 283 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 CDH5P33151 784 aaPredicted RBP15.29■□□□□ 0.04
COL9A2-202ENST00000372748 CRHR1P34998 444 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 STAT5BP51692 787 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 CHN2P52757 468 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 USP46P62068 366 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 DEUP1Q05D60 604 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 TRIM50Q86XT4 487 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 UPF1Q92900 1129 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL9A2-202ENST00000372748 GALNT8Q9NY28 637 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 PCDHGC3Q9UN70 934 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 INPP5FQ9Y2H2 1132 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 AFG3L2Q9Y4W6 797 aa15.29■□□□□ 0.04
COL9A2-202ENST00000372748 NFKBIEO00221 500 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 GSRP00390 522 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 ABCD1P33897 745 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 SLC1A6P48664 564 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 YWHAEP62258 255 aaKnown RBP15.28■□□□□ 0.04
COL9A2-202ENST00000372748 GRM2Q14416 872 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 ZNF699Q32M78 642 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 TEDDM1Q5T9Z0 273 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 UGT2A3Q6UWM9 527 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 DLK2Q6UY11 383 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 FRMD7Q6ZUT3 714 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 PHTF2Q8N3S3 785 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 DEPDC1BQ8WUY9 529 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 PIH1D1Q9NWS0 290 aaKnown RBP15.28■□□□□ 0.04
COL9A2-202ENST00000372748 PHF24Q9UPV7 400 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 MYOCOSA0A1B0GUC4 107 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 KRT19P08727 400 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 ATP6V1B1P15313 513 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 ADORA2AP29274 412 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 TCF7P36402 384 aaPredicted RBP15.28■□□□□ 0.04
COL9A2-202ENST00000372748 ASPAP45381 313 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 SCNN1BP51168 640 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 MAP7Q14244 749 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 TLR1Q15399 786 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 LY6KQ17RY6 165 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 ANKRD20A4Q4UJ75 823 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 FAM102AQ5T9C2 384 aaPredicted RBP15.28■□□□□ 0.04
COL9A2-202ENST00000372748 N4BP2L1Q5TBK1 243 aaPredicted RBP15.28■□□□□ 0.04
COL9A2-202ENST00000372748 WDR78Q5VTH9 848 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 MBLAC2Q68D91 279 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 RNF149Q8NC42 400 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 ICA1LQ8NDH6 482 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 NIFKQ9BYG3 293 aaKnown RBP15.28■□□□□ 0.04
COL9A2-202ENST00000372748 DDX18Q9NVP1 670 aaKnown RBP15.28■□□□□ 0.04
COL9A2-202ENST00000372748 PAK5Q9P286 719 aa15.28■□□□□ 0.04
COL9A2-202ENST00000372748 MSCO60682 206 aa15.27■□□□□ 0.04
COL9A2-202ENST00000372748 FARP2O94887 1054 aaPredicted RBP15.27■□□□□ 0.04
COL9A2-202ENST00000372748 ZBED1O96006 694 aa15.27■□□□□ 0.04
COL9A2-202ENST00000372748 CD1EP15812 388 aa15.27■□□□□ 0.04
COL9A2-202ENST00000372748 ARRB2P32121 409 aa15.27■□□□□ 0.04
COL9A2-202ENST00000372748 CRADDP78560 199 aa15.27■□□□□ 0.04
COL9A2-202ENST00000372748 TBL3Q12788 808 aaKnown RBP15.27■□□□□ 0.04
COL9A2-202ENST00000372748 SCYL2Q6P3W7 929 aa15.27■□□□□ 0.04
COL9A2-202ENST00000372748 RBM44Q6ZP01 1051 aaKnown RBP15.27■□□□□ 0.04
COL9A2-202ENST00000372748 TMEM134Q9H6X4 195 aa15.27■□□□□ 0.04
COL9A2-202ENST00000372748 IFT122Q9HBG6 1241 aa15.27■□□□□ 0.04
COL9A2-202ENST00000372748 MAN1C1Q9NR34 630 aa15.27■□□□□ 0.04
COL9A2-202ENST00000372748 NRBP2Q9NSY0 501 aa15.27■□□□□ 0.04
COL9A2-202ENST00000372748 PCNTO95613 3336 aa15.27■□□□□ 0.04
COL9A2-202ENST00000372748 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.27■□□□□ 0.03
COL9A2-202ENST00000372748 DCXO43602 365 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 FAM189A1O60320 539 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 HMGCRP04035 888 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 ASLP04424 464 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 FGF3P11487 239 aaPredicted RBP15.27■□□□□ 0.03
COL9A2-202ENST00000372748 ITGAXP20702 1163 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 DUOXA2Q1HG44 320 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 DALRD3Q5D0E6 543 aaKnown RBP15.27■□□□□ 0.03
COL9A2-202ENST00000372748 OLFML2BQ68BL8 750 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 PGM2L1Q6PCE3 622 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 PAOXQ6QHF9 649 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 TMC7Q7Z402 723 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 WDR49Q8IV35 697 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 FNIP1Q8TF40 1166 aa15.27■□□□□ 0.03
COL9A2-202ENST00000372748 TFB1MQ8WVM0 346 aaKnown RBP15.27■□□□□ 0.03
COL9A2-202ENST00000372748 PIWIL1Q96J94 861 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms