RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 CCR1P32246 355 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 ATXN1P54253 815 aaKnown RBP16.47■□□□□ 0.23
TMEM53-204ENST00000372243 TBX4P57082 545 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 TAS2R40P59535 323 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 GPR158Q5T848 1215 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 DAB2IPQ5VWQ8 1189 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 SCYL2Q6P3W7 929 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 CYP4V2Q6ZWL3 525 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-204ENST00000372243 MIB1Q86YT6 1006 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 PSTKQ8IV42 348 aaKnown RBP16.47■□□□□ 0.23
TMEM53-204ENST00000372243 ARL14EPQ8N8R7 260 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-204ENST00000372243 SMRP1Q8NCR6 262 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 TEKT4Q8WW24 435 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 KLF16Q9BXK1 252 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-204ENST00000372243 TLR10Q9BXR5 811 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 ARHGEF38Q9NXL2 777 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 SYNJ2BP-COX16A0A087WUM0 186 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-204ENST00000372243 SLC12A8A0AV02 714 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 MSI1O43347 362 aaKnown RBP16.47■□□□□ 0.23
TMEM53-204ENST00000372243 CKMP06732 381 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 MBL2P11226 248 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-204ENST00000372243 TCF4P15884 667 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 FSHRP23945 695 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 IL1R2P27930 398 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 MTHFRP42898 656 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 SSR1P43307 286 aaKnown RBP16.47■□□□□ 0.23
TMEM53-204ENST00000372243 PEX5P50542 639 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 SCAPQ12770 1279 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 RPS6KA1Q15418 735 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 ARL13BQ3SXY8 428 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 STXBP5Q5T5C0 1151 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 EP400NLQ6ZTU2 488 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 FAM131BQ86XD5 332 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 CMTM8Q8IZV2 173 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 UBL4BQ8N7F7 174 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 ITFG1Q8TB96 612 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 PLD4Q96BZ4 506 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 FCRL2Q96LA5 508 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-204ENST00000372243 SLC22A12Q96S37 553 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 PEBP4Q96S96 227 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 CYP2S1Q96SQ9 504 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 APOL5Q9BWW9 433 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 COX16Q9P0S2 106 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 PCSK1NQ9UHG2 260 aa16.47■□□□□ 0.23
TMEM53-204ENST00000372243 CTAGE9A4FU28 777 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 KCNU1A8MYU2 1149 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 DDX3YO15523 660 aaKnown RBP16.46■□□□□ 0.23
TMEM53-204ENST00000372243 CEBPBP17676 345 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 ADRA1BP35368 520 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 AVPR1AP37288 418 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 ERMARDQ5T6L9 678 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 ACBD5Q5T8D3 534 aaPredicted RBP16.46■□□□□ 0.23
TMEM53-204ENST00000372243 NUGGCQ68CJ6 796 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 SYT10Q6XYQ8 523 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 UNC45BQ8IWX7 931 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 RNF34Q969K3 372 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 ZFRQ96KR1 1074 aaKnown RBP16.46■□□□□ 0.23
TMEM53-204ENST00000372243 NECTIN4Q96NY8 510 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 NAPGQ99747 312 aaPredicted RBP16.46■□□□□ 0.23
TMEM53-204ENST00000372243 TKTL2Q9H0I9 626 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 DDX56Q9NY93 547 aaKnown RBP16.46■□□□□ 0.23
TMEM53-204ENST00000372243 DNAI1Q9UI46 699 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 CD207Q9UJ71 328 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 FZD10Q9ULW2 581 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 ARHGAP26Q9UNA1 814 aa16.46■□□□□ 0.23
TMEM53-204ENST00000372243 PACSIN2Q9UNF0 486 aaPredicted RBP16.46■□□□□ 0.23
TMEM53-204ENST00000372243 HELZP42694 1942 aaKnown RBP16.46■□□□□ 0.22
TMEM53-204ENST00000372243 APOEP02649 317 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 RARAP10276 462 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 TNNT1P13805 278 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 TCF3P15923 654 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 CASQ1P31415 396 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 ZC3H12AQ5D1E8 599 aaKnown RBP16.45■□□□□ 0.22
TMEM53-204ENST00000372243 TXNRD3NBQ6F5E7 133 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 DDX42Q86XP3 938 aaKnown RBP eCLIP16.45■□□□□ 0.22
TMEM53-204ENST00000372243 KATNAL2Q8IYT4 538 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 CCDC185Q8N715 623 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 KRT35Q92764 455 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 AZIN2Q96A70 460 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 SNRNP25Q9BV90 132 aaKnown RBP16.45■□□□□ 0.22
TMEM53-204ENST00000372243 GDE1Q9NZC3 331 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 CPQQ9Y646 472 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 DENND4AQ7Z401 1863 aa16.45■□□□□ 0.22
TMEM53-204ENST00000372243 NUP210Q8TEM1 1887 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-204ENST00000372243 ENC1O14682 589 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 FANCGO15287 622 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 STC2O76061 302 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 ATP1A1P05023 1023 aaKnown RBP16.44■□□□□ 0.22
TMEM53-204ENST00000372243 PRLRP16471 622 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 RWDD2BP57060 319 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 PAPD7Q5XG87 772 aaKnown RBP16.44■□□□□ 0.22
TMEM53-204ENST00000372243 NPAS3Q8IXF0 933 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 ATP6V0D2Q8N8Y2 350 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 FAM71BQ8TC56 605 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 SUSD6Q92537 303 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 FGF13Q92913 245 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 BTN2A3PQ96KV6 586 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 HAPLN3Q96S86 360 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 SLITRK6Q9H5Y7 841 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms